RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 NUP88Q99567 741 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-206ENST00000558880 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 MAD2L2Q9UI95 211 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 SYNPO2Q9UMS6 1093 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 STX8Q9UNK0 236 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
TRAF3-206ENST00000558880 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-206ENST00000558880 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 USP17L10C9JJH3 530 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 CXCL11O14625 94 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 SCRN1Q12765 414 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 WTAPQ15007 396 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 TREML2Q5T2D2 321 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 IFIT1BQ5T764 474 aaKnown RBP8.47□□□□□ -1.05
TRAF3-206ENST00000558880 TTBK2Q6IQ55 1244 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 IQCA1Q86XH1 822 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 KDF1Q8NAX2 398 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-206ENST00000558880 SNX21Q969T3 373 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 CPVLQ9H3G5 476 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 R3HDMLQ9H3Y0 253 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 CABP5Q9NP86 173 aa8.47□□□□□ -1.05
TRAF3-206ENST00000558880 KLF18A0A0U1RQI7 1052 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 IGF2BP3O00425 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 SPINT1O43278 529 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 PFKFB2O60825 505 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 PLEKHA8P1O95397 391 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 GOLGA8HP0CJ92 632 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 VCAM1P19320 739 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 CTSOP43234 321 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 HMGCS2P54868 508 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 ZNF543Q08ER8 600 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 GRM4Q14833 912 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 SPICE1Q8N0Z3 855 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 SRBD1Q8N5C6 995 aaKnown RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 NECAB1Q8N987 351 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 REPS2Q8NFH8 660 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 ZNF274Q96GC6 653 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 GMCL1Q96IK5 515 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 TMX3Q96JJ7 454 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 UBAC1Q9BSL1 405 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 UPF2Q9HAU5 1272 aaKnown RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 NCOA5Q9HCD5 579 aaKnown RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-206ENST00000558880 PICK1Q9NRD5 415 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 CSADQ9Y600 493 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 DOCK1Q14185 1865 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 SZT2Q5T011 3432 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 TRIOBPQ9H2D6 2365 aa8.46□□□□□ -1.06
TRAF3-206ENST00000558880 BTBD19C9JJ37 291 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 H0YGN5 161 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 PIK3CDO00329 1044 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 PEX10O60683 326 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 DDAH1O94760 285 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 ZBTB48P10074 688 aaPredicted RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 FDPSP14324 419 aaKnown RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 HOXA7P31268 230 aaPredicted RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 PTGIRP43119 386 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 RCAN1P53805 252 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 CUL4AQ13619 759 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 ZYXQ15942 572 aaKnown RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 CCDC178Q5BJE1 867 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 FAM83BQ5T0W9 1011 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 SLFN13Q68D06 897 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 BTNL9Q6UXG8 535 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 CCDC144CPQ8IYA2 1237 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 PHTF2Q8N3S3 785 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 FANCBQ8NB91 859 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 CHMP4CQ96CF2 233 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 MTMR8Q96EF0 704 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 MAP3K14Q99558 947 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 ADAMTS5Q9UNA0 930 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 DOLKQ9UPQ8 538 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 RBM19Q9Y4C8 960 aaKnown RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
TRAF3-206ENST00000558880 RBBP6Q7Z6E9 1792 aaKnown RBP8.45□□□□□ -1.06
TRAF3-206ENST00000558880 C19orf81C9J6K1 198 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 ADAMTS3O15072 1205 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 PLA2G6O60733 806 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 PPP1R11O60927 126 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-206ENST00000558880 CNMDO75829 334 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-206ENST00000558880 SLC16A2P36021 539 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 SREBF2Q12772 1141 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 PKN1Q16512 942 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 CATSPERGQ6ZRH7 1159 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 TMTC3Q6ZXV5 915 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 NOL8Q76FK4 1167 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms