RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 KCNA10Q16322 511 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 SLC39A5Q6ZMH5 540 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 KLHDC9Q8NEP7 349 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 NSUN6Q8TEA1 469 aaKnown RBP12.73□□□□□ -0.37
PBX1-213ENST00000558796 BRF1Q92994 677 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 WDR11Q9BZH6 1224 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 PXMP2Q9NR77 195 aa12.73□□□□□ -0.37
PBX1-213ENST00000558796 B4DLN1 442 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 CTAGE5O15320 804 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 DYNC1LI2O43237 492 aaPredicted RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 ASGR1P07306 291 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 PSMA5P28066 241 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 GHRHRQ02643 423 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 TRAF1Q13077 416 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 GNASQ5JWF2 1037 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 CCSAPQ6IQ19 270 aaPredicted RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
PBX1-213ENST00000558796 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 MAF1Q9H063 256 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 AP5M1Q9H0R1 490 aa12.72□□□□□ -0.37
PBX1-213ENST00000558796 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
PBX1-213ENST00000558796 LAMA2P24043 3122 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 LAMA3Q16787 3333 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 TRIP12Q14669 1992 aaPredicted RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 RBM47A0AV96 593 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 CDC27P30260 824 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
PBX1-213ENST00000558796 SNX17Q15036 470 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 FSCN1Q16658 493 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 SEPT14Q6ZU15 432 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 PCSK9Q8NBP7 692 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 SCFD2Q8WU76 684 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 COPS5Q92905 334 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 UPF3BQ9BZI7 483 aaKnown RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
PBX1-213ENST00000558796 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
PBX1-213ENST00000558796 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 ARIH2O95376 493 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 NR3C2P08235 984 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 PGM5Q15124 567 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 STXBP2Q15833 593 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 RUFY3Q7L099 469 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 OR6J1Q8NGC5 347 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 VTI1AQ96AJ9 217 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 PDCD2LQ9BRP1 358 aa12.7□□□□□ -0.38
PBX1-213ENST00000558796 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
PBX1-213ENST00000558796 NID2Q14112 1375 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 KAT6AQ92794 2004 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 MAGEA10P43363 369 aaPredicted RBP12.69□□□□□ -0.38
PBX1-213ENST00000558796 RCAN1P53805 252 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 NKX3-2P78367 333 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 TLE2Q04725 743 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 FUT2Q10981 343 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 TTLL4Q14679 1199 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 USP17L6PQ6QN14 398 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 CXCL17Q6UXB2 119 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 CUL5Q93034 780 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 AGXT2Q9BYV1 514 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 PDLIM7Q9NR12 457 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
PBX1-213ENST00000558796 Q9Y3F1 56 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 CYP46A1Q9Y6A2 500 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 TANC1Q9C0D5 1861 aa12.69□□□□□ -0.38
PBX1-213ENST00000558796 WDR81Q562E7 1941 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 SCN5AQ14524 2016 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
PBX1-213ENST00000558796 MEIS2O14770 477 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
PBX1-213ENST00000558796 ZEB2O60315 1214 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
PBX1-213ENST00000558796 CCND2P30279 289 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms