RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
VPS18-202ENST00000558474 ARL6IP4Q66PJ3 421 aaKnown RBP16.93■□□□□ 0.3
VPS18-202ENST00000558474 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 ABRAQ8N0Z2 381 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 DNERQ8NFT8 737 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 SYTL5Q8TDW5 730 aaPredicted RBP16.93■□□□□ 0.3
VPS18-202ENST00000558474 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
VPS18-202ENST00000558474 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
VPS18-202ENST00000558474 CA12O43570 354 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 BCRP11274 1271 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 MAPK4P31152 587 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 BAATQ14032 418 aaPredicted RBP16.92■□□□□ 0.3
VPS18-202ENST00000558474 NFKBIBQ15653 356 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 LETM2Q2VYF4 491 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 FCHSD1Q86WN1 690 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 MBOAT7Q96N66 472 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
VPS18-202ENST00000558474 B4DLN1 442 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 CCNT1O60563 726 aaKnown RBP16.91■□□□□ 0.3
VPS18-202ENST00000558474 PRPHP41219 470 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 ATP2C1P98194 919 aaPredicted RBP16.91■□□□□ 0.3
VPS18-202ENST00000558474 C17orf99Q6UX52 265 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 FERMT2Q96AC1 680 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 ZNF236Q9UL36 1845 aa16.91■□□□□ 0.3
VPS18-202ENST00000558474 NEMFO60524 1076 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 STAM2O75886 525 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 FCER1AP12319 257 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 ATP2B1P20020 1258 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 UBE2HP62256 183 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 CEBPZQ03701 1054 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 KCTD2Q14681 263 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 ZNF174Q15697 407 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 Q4G0T1 1027 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 PCNX4Q63HM2 1172 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 NIPA1Q7RTP0 329 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 CCAR1Q8IX12 1150 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 CHAMP1Q96JM3 812 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 IWS1Q96ST2 819 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 RMDN3Q96TC7 470 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 FTOQ9C0B1 505 aaKnown RBP eCLIP16.9■□□□□ 0.3
VPS18-202ENST00000558474 PXMP2Q9NR77 195 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 COL20A1Q9P218 1284 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 ADD3Q9UEY8 706 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 SRPRBQ9Y5M8 271 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 PLXNB2O15031 1838 aa16.9■□□□□ 0.3
VPS18-202ENST00000558474 ZNFX1Q9P2E3 1918 aaKnown RBP16.9■□□□□ 0.3
VPS18-202ENST00000558474 TBX3O15119 743 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 EDIL3O43854 480 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 CUTAO60888 179 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 MCM7P33993 719 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 PTGDRQ13258 359 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 SKOR2Q2VWA4 1001 aaPredicted RBP16.89■□□□□ 0.29
VPS18-202ENST00000558474 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 KRI1Q8N9T8 703 aaKnown RBP16.89■□□□□ 0.29
VPS18-202ENST00000558474 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
VPS18-202ENST00000558474 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 MMP19Q99542 508 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 LCTP09848 1927 aa16.89■□□□□ 0.29
VPS18-202ENST00000558474 DNAJC25-GNG10A0A024R161 153 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 A0A1W2PQ27 194 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 A0A1W2PQ64 194 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 A0A1W2PQD8 194 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 GOLGA6L4A6NEF3 574 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 POTEB2H3BUK9 544 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 WNT7AO00755 349 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 PTPREP23469 700 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 ME1P48163 572 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 SETQ01105 290 aaPredicted RBP16.88■□□□□ 0.29
VPS18-202ENST00000558474 NBR1Q14596 966 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 PGM5Q15124 567 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 ZIC5Q96T25 663 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
VPS18-202ENST00000558474 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
VPS18-202ENST00000558474 PEX10O60683 326 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 AOC2O75106 756 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 MBD3O95983 291 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 OR52Z1P0C646 297 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 CCND2P30279 289 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 ZNF76P36508 570 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 GRM1Q13255 1194 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 CRHR2Q13324 411 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 MTMR9Q96QG7 549 aa16.87■□□□□ 0.29
VPS18-202ENST00000558474 PORCNQ9H237 461 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms