RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MLLT1Q03111 559 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 NTRK3Q16288 839 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 FCHSD1Q86WN1 690 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 ZNF713Q8N859 430 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 SLC26A6Q9BXS9 759 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 STXBP3O00186 592 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-205ENST00000558428 SCG2P13521 617 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 ADCYAP1R1P41586 468 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 SCRN1Q12765 414 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 PFKFB3Q16875 520 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-205ENST00000558428 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 CPLX2Q6PUV4 134 aaKnown RBP14.22□□□□□ -0.13
SMAD3-205ENST00000558428 USP17L6PQ6QN14 398 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 DIS3LQ8TF46 1054 aaKnown RBP14.22□□□□□ -0.13
SMAD3-205ENST00000558428 KIF2CQ99661 725 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-205ENST00000558428 XPNPEP3Q9NQH7 507 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 BARHL2Q9NY43 387 aa14.22□□□□□ -0.13
SMAD3-205ENST00000558428 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PIK3CDO00329 1044 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 MEIS2O14770 477 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 ADCY6O43306 1168 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PFKFB2O60825 505 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 DUSP11O75319 330 aaKnown RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PGK1P00558 417 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 NR3C2P08235 984 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 TNFAIP2Q03169 654 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 SSRP1Q08945 709 aaKnown RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 STXBP2Q15833 593 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PKN1Q16512 942 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 UBE2SQ16763 222 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 GJC2Q5T442 439 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 UBE2Q1Q7Z7E8 422 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 ARRDC4Q8NCT1 418 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.13
SMAD3-205ENST00000558428 PDCD2LQ9BRP1 358 aa14.21□□□□□ -0.13
SMAD3-205ENST00000558428 TNRC18O15417 2968 aaPredicted RBP14.21□□□□□ -0.14
SMAD3-205ENST00000558428 DNAH12Q6ZR08 3092 aa14.21□□□□□ -0.14
SMAD3-205ENST00000558428 KBTBD13C9JR72 458 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 CDKL5O76039 1030 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 LARGE1O95461 756 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 MYCLP12524 364 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-205ENST00000558428 ADCY7P51828 1080 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 PGM5Q15124 567 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 LRRC41Q15345 812 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 ME3Q16798 604 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 IQSEC1Q6DN90 963 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 NECAB2Q7Z6G3 386 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 RNF180Q86T96 592 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 BACH2Q9BYV9 841 aa14.2□□□□□ -0.14
SMAD3-205ENST00000558428 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
SMAD3-205ENST00000558428 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 DNM1LO00429 736 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 SMPD1P17405 629 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 RABEP1Q15276 862 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 NECAB1Q8N987 351 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 IL31RAQ8NI17 732 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-205ENST00000558428 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 WDR11Q9BZH6 1224 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 GLT8D2Q9H1C3 349 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 C11orf49Q9H6J7 331 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 SPC25Q9HBM1 224 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 RIC8AQ9NPQ8 531 aa14.19□□□□□ -0.14
SMAD3-205ENST00000558428 GNEQ9Y223 722 aaKnown RBP14.19□□□□□ -0.14
SMAD3-205ENST00000558428 FRMPD4Q14CM0 1322 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 MYH7BA7E2Y1 1941 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 SPDYE3A6NKU9 549 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 ADAMTS4O75173 837 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
SMAD3-205ENST00000558428 DEXIO95424 95 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 C6orf222P0C671 652 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-205ENST00000558428 CCND2P30279 289 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 GJA9P57773 515 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 TTLL4Q14679 1199 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 DUSP28Q4G0W2 176 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 TLK2Q86UE8 772 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 HTATIP2Q9BUP3 242 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 LIMCH1Q9UPQ0 1083 aa14.18□□□□□ -0.14
SMAD3-205ENST00000558428 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 DYNC1LI2O43237 492 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-205ENST00000558428 COL6A1P12109 1028 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms