RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 ZSCAN31Q96LW9 406 aaPredicted RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 UPF3AQ9H1J1 476 aaKnown RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 PDGFCQ9NRA1 345 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 CTAGE5O15320 804 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 C6orf222P0C671 652 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 CALML3P27482 149 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 ANTXR2P58335 489 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 RPS6P62753 249 aaKnown RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 TOB2Q14106 344 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 TAPT1Q6NXT6 567 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 CHST3Q7LGC8 479 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 PDLIM2Q96JY6 352 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 PDLIM7Q9NR12 457 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 MYH6P13533 1939 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 SMPD1P17405 629 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 EVCP57679 992 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 TLE2Q04725 743 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 Q6ZUG5 572 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 TMEM87BQ96K49 555 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 PRDM5Q9NQX1 630 aaPredicted RBP11.86□□□□□ -0.51
TPM1-212ENST00000558347 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
TPM1-212ENST00000558347 TRIM43BA6NCK2 446 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
TPM1-212ENST00000558347 PRC1O43663 620 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 ASGR1P07306 291 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 BEX3Q00994 111 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 TDHQ8IZJ6 230 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 TRIM43Q96BQ3 446 aaPredicted RBP11.85□□□□□ -0.51
TPM1-212ENST00000558347 TCEANC2Q96MN5 208 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
TPM1-212ENST00000558347 PRKAG2Q9UGJ0 569 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 ATP6V1DQ9Y5K8 247 aa11.85□□□□□ -0.51
TPM1-212ENST00000558347 ABCB11O95342 1321 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
TPM1-212ENST00000558347 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 DHX16O60231 1041 aaKnown RBP11.84□□□□□ -0.51
TPM1-212ENST00000558347 PQBP1O60828 265 aaKnown RBP11.84□□□□□ -0.51
TPM1-212ENST00000558347 NKX3-2P78367 333 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
TPM1-212ENST00000558347 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 PCSK9Q8NBP7 692 aaKnown RBP11.84□□□□□ -0.51
TPM1-212ENST00000558347 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 VTA1Q9NP79 307 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
TPM1-212ENST00000558347 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 PPP1R11O60927 126 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 CLTBP09497 229 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 EDNRBP24530 442 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 ITGB8P26012 769 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 LIFRP42702 1097 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 FGD1P98174 961 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 TROAPQ12815 778 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 GRM4Q14833 912 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 WTAPQ15007 396 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 BADQ92934 168 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 BRF1Q92994 677 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 MTMR8Q96EF0 704 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 ZNF274Q96GC6 653 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 LBHD1Q9BQE6 289 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
TPM1-212ENST00000558347 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms