RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 NOC4LQ9BVI4 516 aaKnown RBP18.13■□□□□ 0.49
TPM1-211ENST00000558314 ALDH8A1Q9H2A2 487 aaPredicted RBP18.13■□□□□ 0.49
TPM1-211ENST00000558314 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 CFBP00751 764 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 EIF2AK2P19525 551 aaKnown RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 TTLL4Q14679 1199 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 NBPF20Q3BBV1 942 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 CYB5R4Q7L1T6 521 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 MCF2L2Q86YR7 1114 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 ZNF576Q9H609 170 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 JMJD4Q9H9V9 463 aa18.12■□□□□ 0.49
TPM1-211ENST00000558314 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 MRPL11Q9Y3B7 192 aaKnown RBP18.12■□□□□ 0.49
TPM1-211ENST00000558314 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■■□□□ 14
TPM1-211ENST00000558314 ARIH2O95376 493 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 DEFB128Q7Z7B8 93 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 HOMER1Q86YM7 354 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 SYTL5Q8TDW5 730 aaPredicted RBP18.11■□□□□ 0.49
TPM1-211ENST00000558314 NSUN6Q8TEA1 469 aaKnown RBP18.11■□□□□ 0.49
TPM1-211ENST00000558314 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 PPM1EQ8WY54 764 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 ANKS1AQ92625 1134 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 RMDN3Q96TC7 470 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 PBX4Q9BYU1 374 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 MSRAQ9UJ68 235 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 NOD1Q9Y239 953 aa18.11■□□□□ 0.49
TPM1-211ENST00000558314 LAMA2P24043 3122 aaKnown RBP18.11■□□□□ 0.49
TPM1-211ENST00000558314 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
TPM1-211ENST00000558314 SORBS3O60504 671 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 SUPT20HL2P0C7V6 817 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 EDNRBP24530 442 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 NT5C2P49902 561 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 PTH1RQ03431 593 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 RGS22Q8NE09 1264 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 SEZ6LQ9BYH1 1024 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 WNT8AQ9H1J5 351 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 COL20A1Q9P218 1284 aa18.1■□□□□ 0.49
TPM1-211ENST00000558314 TMEM265A0A087WTH1 108 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 ERICH2A1L162 156 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 MYCLP12524 364 aaPredicted RBP18.09■□□□□ 0.49
TPM1-211ENST00000558314 STXBP2Q15833 593 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
TPM1-211ENST00000558314 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
TPM1-211ENST00000558314 AFG1LQ8WV93 481 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 AMNQ9BXJ7 453 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 NKX2-4Q9H2Z4 354 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 PRDM12Q9H4Q4 367 aa18.09■□□□□ 0.49
TPM1-211ENST00000558314 GH1P01241 217 aa18.08■□□□□ 0.48
TPM1-211ENST00000558314 CHMLP26374 656 aa18.08■□□□□ 0.48
TPM1-211ENST00000558314 RABGGTBP53611 331 aa18.08■□□□□ 0.48
TPM1-211ENST00000558314 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
TPM1-211ENST00000558314 A6NJR5 290 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 KPNA6O60684 536 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 CYP21A2P08686 494 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 HOXA13P31271 388 aaPredicted RBP18.07■□□□□ 0.48
TPM1-211ENST00000558314 SEC23AQ15436 765 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 RASIP1Q5U651 963 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 ZFP91Q96JP5 570 aaPredicted RBP18.07■□□□□ 0.48
TPM1-211ENST00000558314 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
TPM1-211ENST00000558314 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
TPM1-211ENST00000558314 FTOQ9C0B1 505 aaKnown RBP eCLIP18.07■□□□□ 0.48
TPM1-211ENST00000558314 MAD2L2Q9UI95 211 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 MRVI1Q9Y6F6 885 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 SLC4A7Q9Y6M7 1214 aa18.07■□□□□ 0.48
TPM1-211ENST00000558314 IGFBP4P22692 258 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 WTAPQ15007 396 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 RAB30Q15771 203 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 SENP2Q9HC62 589 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 PXMP2Q9NR77 195 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 TAF6LQ9Y6J9 622 aa18.06■□□□□ 0.48
TPM1-211ENST00000558314 ZBTB5O15062 677 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
TPM1-211ENST00000558314 NR3C2P08235 984 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 MMP3P08254 477 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
TPM1-211ENST00000558314 FCHSD1Q86WN1 690 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 NCOA7Q8NI08 942 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 PIGSQ96S52 555 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 IWS1Q96ST2 819 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
TPM1-211ENST00000558314 YBX2Q9Y2T7 364 aaKnown RBP18.05■□□□□ 0.48
TPM1-211ENST00000558314 MYH6P13533 1939 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 E7EWF7 191 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 MYOGP15173 224 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
TPM1-211ENST00000558314 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 CCDC85BQ15834 202 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms