RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 NEK1Q96PY6 1258 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 NUP88Q99567 741 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 APBA2Q99767 749 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 TRIM5Q9C035 493 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 KCNF1Q9H3M0 494 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 L2HGDHQ9H9P8 463 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
RTF1-205ENST00000558298 PRR12Q9ULL5 1215 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 DNAJC25-GNG10A0A024R161 153 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 TMEM232C9JQI7 657 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 IFIT3O14879 490 aaKnown RBP9.09□□□□□ -0.95
RTF1-205ENST00000558298 PRC1O43663 620 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ZBED4O75132 1171 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 HMGCRP04035 888 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ICAM1P05362 532 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 CALM1P0DP23 149 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 CALM2P0DP24 149 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 CALM3P0DP25 149 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 CCL5P13501 91 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ERCC3P19447 782 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 PSMA5P28066 241 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 STAT3P40763 770 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 RGS2P41220 211 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 GTF2A1P52655 376 aaPredicted RBP9.09□□□□□ -0.95
RTF1-205ENST00000558298 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 MAP2K5Q13163 448 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ANKRD1Q15327 319 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 SYDE2Q5VT97 1194 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ICE2Q659A1 982 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 OLFML2BQ68BL8 750 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ATL3Q6DD88 541 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 LEKR1Q6ZMV7 388 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
RTF1-205ENST00000558298 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 PPM1EQ8WY54 764 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 C16orf45Q96MC5 204 aaPredicted RBP9.09□□□□□ -0.95
RTF1-205ENST00000558298 NCAPGQ9BPX3 1015 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 PAGR1Q9BTK6 254 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 SPZ1Q9BXG8 430 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 UNC93B1Q9H1C4 597 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 RIOX1Q9H6W3 641 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 NRBP1Q9UHY1 535 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 PYCARDQ9ULZ3 195 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 SNX14Q9Y5W7 946 aa9.09□□□□□ -0.95
RTF1-205ENST00000558298 PHLPP2Q6ZVD8 1323 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 PARP1P09874 1014 aaKnown RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 KIF5BP33176 963 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 GNAQP50148 359 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 UBXN2AP68543 259 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 PLCB2Q00722 1185 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 TYRO3Q06418 890 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 TRIM32Q13049 653 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 TRAF1Q13077 416 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 ZRSR1Q15695 479 aaKnown RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 ADCK5Q3MIX3 580 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 TMEM67Q5HYA8 995 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 CCDC186Q7Z3E2 898 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 CCDC91Q7Z6B0 441 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 CATIPQ7Z7H3 387 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 ZNF654Q8IZM8 581 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 U2AF1L4Q8WU68 220 aaKnown RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 LZTS2Q9BRK4 669 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 ZKSCAN3Q9BRR0 538 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 ALDH8A1Q9H2A2 487 aaPredicted RBP9.08□□□□□ -0.96
RTF1-205ENST00000558298 TNMDQ9H2S6 317 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 MAD2L2Q9UI95 211 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
RTF1-205ENST00000558298 BAZ2BQ9UIF8 2168 aaKnown RBP9.07□□□□□ -0.96
RTF1-205ENST00000558298 PFASO15067 1338 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 MCM3APO60318 1980 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 EFCAB8A8MWE9 144 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 RPS6KA5O75582 802 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 SGPL1O95470 568 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 FCER1AP12319 257 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 PTGS1P23219 599 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 CCL14Q16627 93 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 CCDC96Q2M329 555 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
RTF1-205ENST00000558298 APOA5Q6Q788 366 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 BLOC1S2Q6QNY1 142 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 MAMDC4Q6UXC1 1216 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 KCTD1Q719H9 257 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 RASGRP2Q7LDG7 609 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 UBXN4Q92575 508 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 TMEM106CQ9BVX2 250 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
RTF1-205ENST00000558298 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms