RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 MEIS2O14770 477 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 DEXIO95424 95 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 CNGA1P29973 690 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
CDK12-203ENST00000558240 NAPAP54920 295 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 SOX10P56693 466 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 LHX8Q68G74 356 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
CDK12-203ENST00000558240 U2AF1L4Q8WU68 220 aaKnown RBP13.84□□□□□ -0.19
CDK12-203ENST00000558240 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
CDK12-203ENST00000558240 KATNBL1Q9H079 304 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 DDX20Q9UHI6 824 aaKnown RBP13.84□□□□□ -0.19
CDK12-203ENST00000558240 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 LARGE1O95461 756 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 AKR1A1P14550 325 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 PDE4DQ08499 809 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 ARHGEF16Q5VV41 709 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 USP17L6PQ6QN14 398 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 FAM177A1Q8N128 213 aaPredicted RBP13.83□□□□□ -0.2
CDK12-203ENST00000558240 NECAB1Q8N987 351 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 SMARCC2Q8TAQ2 1214 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 SH3GLB2Q9NR46 395 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 SH2B1Q9NRF2 756 aaPredicted RBP13.83□□□□□ -0.2
CDK12-203ENST00000558240 ZHX1Q9UKY1 873 aaPredicted RBP13.83□□□□□ -0.2
CDK12-203ENST00000558240 OGDHLQ9ULD0 1010 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 FAM184BQ9ULE4 1060 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 MYH7BA7E2Y1 1941 aa13.83□□□□□ -0.2
CDK12-203ENST00000558240 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
CDK12-203ENST00000558240 NR3C2P08235 984 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
CDK12-203ENST00000558240 MCM2P49736 904 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 STXBP2Q15833 593 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 CCDC144BQ3MJ40 725 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 PDCD2LQ9BRP1 358 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
CDK12-203ENST00000558240 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
CDK12-203ENST00000558240 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 CAPN15O75808 1086 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 EIF3JO75822 258 aaKnown RBP13.81□□□□□ -0.2
CDK12-203ENST00000558240 CTDNEP1O95476 244 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
CDK12-203ENST00000558240 RARBP10826 455 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 EIF2AK2P19525 551 aaKnown RBP13.81□□□□□ -0.2
CDK12-203ENST00000558240 GNA11P29992 359 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 RGS19P49795 217 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 ADCY7P51828 1080 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 IQSEC1Q6DN90 963 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 ANKLE1Q8NAG6 615 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
CDK12-203ENST00000558240 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
CDK12-203ENST00000558240 SPDYE3A6NKU9 549 aa13.8□□□□□ -0.2
CDK12-203ENST00000558240 DUSP11O75319 330 aaKnown RBP13.8□□□□□ -0.2
CDK12-203ENST00000558240 PGM5Q15124 567 aa13.8□□□□□ -0.2
CDK12-203ENST00000558240 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
CDK12-203ENST00000558240 FBXO16Q8IX29 292 aaPredicted RBP13.8□□□□□ -0.2
CDK12-203ENST00000558240 NSUN7Q8NE18 718 aaKnown RBP13.8□□□□□ -0.2
CDK12-203ENST00000558240 WASF1Q92558 559 aa13.8□□□□□ -0.2
CDK12-203ENST00000558240 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
CDK12-203ENST00000558240 STAM2O75886 525 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 CCND2P30279 289 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 ADCYAP1R1P41586 468 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
CDK12-203ENST00000558240 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 ST3GAL1Q11201 340 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 AP3B2Q13367 1082 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 UBE2SQ16763 222 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 MCTP2Q6DN12 878 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 BICD2Q8TD16 824 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 LLPHQ9BRT6 129 aaKnown RBP13.79□□□□□ -0.2
CDK12-203ENST00000558240 EHMT1Q9H9B1 1298 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 VPS54Q9P1Q0 977 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 Q9Y3F1 56 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
CDK12-203ENST00000558240 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
CDK12-203ENST00000558240 FDPSP14324 419 aaKnown RBP13.78□□□□□ -0.2
CDK12-203ENST00000558240 XBP1P17861 261 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 NLRP5P59047 1200 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms