RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CFHR5Q9BXR6 569 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 ANO3Q9BYT9 981 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
TPM1-209ENST00000558072 GOLGA6L4A6NEF3 574 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 OPLAHO14841 1288 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 CYP3A4P08684 503 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
TPM1-209ENST00000558072 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
TPM1-209ENST00000558072 STK38Q15208 465 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 TTC38Q5R3I4 469 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 ANO1Q5XXA6 986 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 USP17L6PQ6QN14 398 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 C17orf99Q6UX52 265 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 MMP19Q99542 508 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 ELP1O95163 1332 aa14.11□□□□□ -0.15
TPM1-209ENST00000558072 POTEB2H3BUK9 544 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 PPP6R2O75170 966 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 ZNF76P36508 570 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 ARHGAP4P98171 946 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 MAP2K1Q02750 393 aaPredicted RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 DNM1Q05193 864 aaKnown RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 BAATQ14032 418 aaPredicted RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 KIF22Q14807 665 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 UBE2SQ16763 222 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 INF2Q27J81 1249 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 NOM1Q5C9Z4 860 aaKnown RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 SLC30A10Q6XR72 485 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 PGBD1Q96JS3 809 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 RMDN3Q96TC7 470 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 BEGAINQ9BUH8 593 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 A1CFQ9NQ94 594 aaKnown RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.1□□□□□ -0.15
TPM1-209ENST00000558072 SAGE1Q9NXZ1 904 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 RCOR1Q9UKL0 485 aa14.1□□□□□ -0.15
TPM1-209ENST00000558072 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 TBX3O15119 743 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 MAFGO15525 162 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 MARCH6O60337 910 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 CYP3A7P24462 503 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
TPM1-209ENST00000558072 CIITAP33076 1130 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 SLC39A14Q15043 492 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 LETM2Q2VYF4 491 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 NIPA1Q7RTP0 329 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 PLEKHH3Q7Z736 793 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 CD99L2Q8TCZ2 262 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 RASGRP4Q8TDF6 673 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 CDHR1Q96JP9 859 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 RAB34Q9BZG1 259 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
TPM1-209ENST00000558072 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
TPM1-209ENST00000558072 ASB14A6NK59 587 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 SPTLC2O15270 562 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 FOXN1O15353 648 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 NEMFO60524 1076 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 CCNT1O60563 726 aaKnown RBP14.08□□□□□ -0.16
TPM1-209ENST00000558072 HSPA1AP0DMV8 641 aaKnown RBP14.08□□□□□ -0.16
TPM1-209ENST00000558072 HSPA1BP0DMV9 641 aaKnown RBP14.08□□□□□ -0.16
TPM1-209ENST00000558072 CCND2P30279 289 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 PRPHP41219 470 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 PCNX4Q63HM2 1172 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 ZNF467Q7Z7K2 595 aaPredicted RBP14.08□□□□□ -0.16
TPM1-209ENST00000558072 NLRX1Q86UT6 975 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 SLFN12Q8IYM2 578 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 MSL3Q8N5Y2 521 aaKnown RBP14.08□□□□□ -0.16
TPM1-209ENST00000558072 TMEM87AQ8NBN3 555 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 SOCS4Q8WXH5 440 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.16
TPM1-209ENST00000558072 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 GPR25O00155 361 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 GNRH1P01148 92 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 PGK2P07205 417 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 ATP2B1P20020 1258 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 PTPREP23469 700 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 HOXD10P28358 340 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 FCGRTP55899 365 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 TMEM266Q2M3C6 531 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 Q4G0T1 1027 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 FAM20AQ96MK3 541 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 PXMP2Q9NR77 195 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 COL20A1Q9P218 1284 aa14.07□□□□□ -0.16
TPM1-209ENST00000558072 TFIP11Q9UBB9 837 aaKnown RBP14.07□□□□□ -0.16
TPM1-209ENST00000558072 DDX25Q9UHL0 483 aaKnown RBP14.07□□□□□ -0.16
TPM1-209ENST00000558072 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms