RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 U2AF1L4Q8WU68 220 aaKnown RBP19.25■□□□□ 0.67
PBX4-202ENST00000557978 GTF3C6Q969F1 213 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 DDX20Q9UHI6 824 aaKnown RBP19.25■□□□□ 0.67
PBX4-202ENST00000557978 STXBP3O00186 592 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 ZNF865P0CJ78 1059 aaPredicted RBP19.25■□□□□ 0.67
PBX4-202ENST00000557978 AKR1A1P14550 325 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 SOX10P56693 466 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 PDE4DQ08499 809 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 PKN1Q16512 942 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 FCHSD1Q86WN1 690 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 VTA1Q9NP79 307 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 PXMP2Q9NR77 195 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
PBX4-202ENST00000557978 COL20A1Q9P218 1284 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
PBX4-202ENST00000557978 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
PBX4-202ENST00000557978 POTEFA5A3E0 1075 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 MEIS2O14770 477 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 TFRCP02786 760 aaKnown RBP19.24■□□□□ 0.67
PBX4-202ENST00000557978 EDNRBP24530 442 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 USP17L6PQ6QN14 398 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 SH3GLB2Q9NR46 395 aa19.24■□□□□ 0.67
PBX4-202ENST00000557978 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 CAPN15O75808 1086 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 LARGE1O95461 756 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 MCM2P49736 904 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 ADCY7P51828 1080 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 STXBP2Q15833 593 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 NECAB1Q8N987 351 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 CRISPLD2Q9H0B8 497 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 RIC8AQ9NPQ8 531 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
PBX4-202ENST00000557978 ESYT2A0FGR8 921 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 PPFIA3O75145 1194 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 NR3C2P08235 984 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 RARBP10826 455 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
PBX4-202ENST00000557978 GNA11P29992 359 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 LHX8Q68G74 356 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 TYW1BQ6NUM6 668 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 EEPD1Q7L9B9 569 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
PBX4-202ENST00000557978 WASF1Q92558 559 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 PDCD2LQ9BRP1 358 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 KATNBL1Q9H079 304 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 C6orf50Q9HD87 102 aa19.22■□□□□ 0.67
PBX4-202ENST00000557978 SPDYE3A6NKU9 549 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 FOSP01100 380 aaPredicted RBP19.21■□□□□ 0.67
PBX4-202ENST00000557978 XBP1P17861 261 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 EN2P19622 333 aaPredicted RBP19.21■□□□□ 0.67
PBX4-202ENST00000557978 CCDC144BQ3MJ40 725 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 ANKLE1Q8NAG6 615 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 BICD2Q8TD16 824 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 ZMYND12Q9H0C1 365 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 EHMT1Q9H9B1 1298 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 OGDHLQ9ULD0 1010 aa19.21■□□□□ 0.67
PBX4-202ENST00000557978 EIF3JO75822 258 aaKnown RBP19.2■□□□□ 0.66
PBX4-202ENST00000557978 PGM5Q15124 567 aa19.2■□□□□ 0.66
PBX4-202ENST00000557978 MCTP2Q6DN12 878 aa19.2■□□□□ 0.66
PBX4-202ENST00000557978 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
PBX4-202ENST00000557978 FBXO16Q8IX29 292 aaPredicted RBP19.2■□□□□ 0.66
PBX4-202ENST00000557978 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
PBX4-202ENST00000557978 CTDNEP1O95476 244 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
PBX4-202ENST00000557978 CCND2P30279 289 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 TNFAIP2Q03169 654 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 AP3B2Q13367 1082 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 IFFO2Q5TF58 517 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 TAPT1Q6NXT6 567 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 VSIG10LQ86VR7 867 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 DDX49Q9Y6V7 483 aaKnown RBP19.19■□□□□ 0.66
PBX4-202ENST00000557978 FRMPD4Q14CM0 1322 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 DOCK5Q9H7D0 1870 aa19.19■□□□□ 0.66
PBX4-202ENST00000557978 RBM47A0AV96 593 aaKnown RBP19.18■□□□□ 0.66
PBX4-202ENST00000557978 DUSP11O75319 330 aaKnown RBP19.18■□□□□ 0.66
PBX4-202ENST00000557978 STAM2O75886 525 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 NLRP5P59047 1200 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 UBE2SQ16763 222 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 ANO1Q5XXA6 986 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 ARRDC4Q8NCT1 418 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 NSUN7Q8NE18 718 aaKnown RBP19.18■□□□□ 0.66
PBX4-202ENST00000557978 SCFD2Q8WU76 684 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
PBX4-202ENST00000557978 PCDHA6Q9UN73 950 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 PCDHA8Q9Y5H6 950 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 DNAH12Q6ZR08 3092 aa19.18■□□□□ 0.66
PBX4-202ENST00000557978 ADCYAP1R1P41586 468 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 CLK2P49760 499 aaKnown RBP19.17■□□□□ 0.66
PBX4-202ENST00000557978 GALNT17Q6IS24 598 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 SPC25Q9HBM1 224 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 XPNPEP3Q9NQH7 507 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 PDGFCQ9NRA1 345 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
PBX4-202ENST00000557978 TTLL4Q14679 1199 aa19.17■□□□□ 0.66
PBX4-202ENST00000557978 PCNX4Q63HM2 1172 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms