RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 DTHD1Q6ZMT9 781 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 GIMAP8Q8ND71 665 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 MRPS27Q92552 414 aaKnown RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 P2RX7Q99572 595 aaKnown RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 BTBD19C9JJ37 291 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 OPLAHO14841 1288 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 CCNT1O60563 726 aaKnown RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 CAVIN2O95810 425 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 FCER1AP12319 257 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 GJA5P36382 358 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 RPS6P62753 249 aaKnown RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 FAM160A1Q05DH4 1040 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 PTGDRQ13258 359 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 ARHGEF6Q15052 776 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 INF2Q27J81 1249 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 CEP55Q53EZ4 464 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 MOB2Q70IA6 237 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 SHISA4Q96DD7 197 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 RIT2Q99578 217 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 WDR11Q9BZH6 1224 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 RAVER2Q9HCJ3 691 aaKnown RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 BIN2Q9UBW5 565 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 ABT1Q9ULW3 272 aaKnown RBP11.91□□□□□ -0.5
GABRB3-213ENST00000557765 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
GABRB3-213ENST00000557765 ASB14A6NK59 587 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 TLR2O60603 784 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 PPFIA3O75145 1194 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 GNRH1P01148 92 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 CALCRLQ16602 461 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 HAUS3Q68CZ6 603 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 NLRX1Q86UT6 975 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 ANKRD35Q8N283 1001 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 RDM1Q8NG50 284 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 ERMNQ8TAM6 284 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-213ENST00000557765 GPRASP2Q96D09 838 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 RMDN3Q96TC7 470 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 TBC1D22BQ9NU19 505 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 CYP39A1Q9NYL5 469 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 RBPJLQ9UBG7 517 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
GABRB3-213ENST00000557765 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
GABRB3-213ENST00000557765 PCDHA7Q9UN72 937 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
GABRB3-213ENST00000557765 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 ZNF236Q9UL36 1845 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 MEIS1O00470 390 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 CA12O43570 354 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 TRAK2O60296 914 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 CCND2P30279 289 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 ZNF76P36508 570 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 AXDND1Q5T1B0 1012 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 RESP18Q5W5W9 173 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 IGSF22Q8N9C0 903 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 MTMR9Q96QG7 549 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 KCNMB3Q9NPA1 279 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 FBXO2Q9UK22 296 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-213ENST00000557765 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 CLIC4Q9Y696 253 aa11.89□□□□□ -0.51
GABRB3-213ENST00000557765 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
GABRB3-213ENST00000557765 FAM155AB1AL88 458 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-213ENST00000557765 NFIBO00712 420 aa11.88□□□□□ -0.51
GABRB3-213ENST00000557765 MARCH6O60337 910 aa11.88□□□□□ -0.51
GABRB3-213ENST00000557765 KINO60870 393 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms