RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
SHMT2-235ENST00000557740 CUL9Q8IWT3 2517 aa17.06■□□□□ 0.32
SHMT2-235ENST00000557740 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 SUPT20HL2P0C7V6 817 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 FOSL2P15408 326 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 CHMLP26374 656 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 FAM47CQ5HY64 1035 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
SHMT2-235ENST00000557740 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
SHMT2-235ENST00000557740 MAFAQ8NHW3 353 aaPredicted RBP17.05■□□□□ 0.32
SHMT2-235ENST00000557740 ERICH2A1L162 156 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 KLRF2D3W0D1 207 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 KPNA6O60684 536 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 CCL23P55773 120 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 SEC23AQ15436 765 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 COPS5Q92905 334 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 TIFAQ96CG3 184 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 TAAR1Q96RJ0 339 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
SHMT2-235ENST00000557740 TRMT13Q9NUP7 481 aaKnown RBP17.04■□□□□ 0.32
SHMT2-235ENST00000557740 A6NJR5 290 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 FGBP02675 491 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 CYP21A2P08686 494 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 PTH1RQ03431 593 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 SART3Q15020 963 aaKnown RBP17.03■□□□□ 0.32
SHMT2-235ENST00000557740 STXBP2Q15833 593 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 RASIP1Q5U651 963 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 ARHGEF16Q5VV41 709 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHMT2-235ENST00000557740 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 IWS1Q96ST2 819 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 WNT8AQ9H1J5 351 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 COL20A1Q9P218 1284 aa17.03■□□□□ 0.32
SHMT2-235ENST00000557740 IFIT3O14879 490 aaKnown RBP17.02■□□□□ 0.32
SHMT2-235ENST00000557740 ZBTB5O15062 677 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 ARIH2O95376 493 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 CFBP00751 764 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 GH1P01241 217 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 CYP2C9P11712 490 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
SHMT2-235ENST00000557740 NBPF20Q3BBV1 942 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.32
SHMT2-235ENST00000557740 ZNF576Q9H609 170 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 MAD2L2Q9UI95 211 aa17.02■□□□□ 0.32
SHMT2-235ENST00000557740 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 SGSM2O43147 1006 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 RAB30Q15771 203 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 CCDC62Q6P9F0 684 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 OTOP2Q7RTS6 562 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 SCLYQ96I15 445 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 MSRAQ9UJ68 235 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 NOD1Q9Y239 953 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
SHMT2-235ENST00000557740 E7EWF7 191 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 NR3C2P08235 984 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 PBX2P40425 430 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 HSD17B4P51659 736 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 TRAF1Q13077 416 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 GRM4Q14833 912 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 GRIN2CQ14957 1233 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 WTAPQ15007 396 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 LY6KQ17RY6 165 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 CHST3Q7LGC8 479 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 AFG1LQ8WV93 481 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 PXMP2Q9NR77 195 aa17■□□□□ 0.31
SHMT2-235ENST00000557740 CXXC1Q9P0U4 656 aaPredicted RBP17■□□□□ 0.31
SHMT2-235ENST00000557740 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 PALM3A6NDB9 673 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-235ENST00000557740 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-235ENST00000557740 PFKMP08237 780 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 MMP3P08254 477 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-235ENST00000557740 ARHGAP1Q07960 439 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 TMEM67Q5HYA8 995 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 PPP1R13LQ8WUF5 828 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 MTMR8Q96EF0 704 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 MAP3K20Q9NYL2 800 aaKnown RBP16.99■□□□□ 0.31
SHMT2-235ENST00000557740 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
SHMT2-235ENST00000557740 OPLAHO14841 1288 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
SHMT2-235ENST00000557740 HOXA13P31271 388 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-235ENST00000557740 GHRHRQ02643 423 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 CATIPQ7Z7H3 387 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 PIGSQ96S52 555 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 GAS2L1Q99501 681 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-235ENST00000557740 TAF6LQ9Y6J9 622 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 SLC4A7Q9Y6M7 1214 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
SHMT2-235ENST00000557740 PITPNM1O00562 1244 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms