RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 ZNF236Q9UL36 1845 aa16.17■□□□□ 0.18
RIPK3-206ENST00000557624 FOSP01100 380 aaPredicted RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 EIF2AK2P19525 551 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 TNFRSF25Q93038 417 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 MYH7BA7E2Y1 1941 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 FOXN1O15353 648 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 MAP2K5Q13163 448 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 INF2Q27J81 1249 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 MCTP2Q6DN12 878 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 EHMT1Q9H9B1 1298 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 PXMP2Q9NR77 195 aa16.16■□□□□ 0.18
RIPK3-206ENST00000557624 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
RIPK3-206ENST00000557624 MCM3APO60318 1980 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 ASTN1O14525 1302 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 CYP2B6P20813 491 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 RGS2P41220 211 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 PRKCZQ05513 592 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 FGD4Q96M96 766 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 SLC5A4Q9NY91 659 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 GABRQQ9UN88 632 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 ZDHHC9Q9Y397 364 aa16.15■□□□□ 0.18
RIPK3-206ENST00000557624 BRD1O95696 1058 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 F13A1P00488 732 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 FLT3LGP49771 235 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 ALDH5A1P51649 535 aaPredicted RBP16.14■□□□□ 0.17
RIPK3-206ENST00000557624 NUCB2P80303 420 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 RESTQ13127 1097 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 DNERQ8NFT8 737 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 IL31RAQ8NI17 732 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 APBA2Q99767 749 aa16.14■□□□□ 0.17
RIPK3-206ENST00000557624 CIZ1Q9ULV3 898 aaPredicted RBP16.14■□□□□ 0.17
RIPK3-206ENST00000557624 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 HSPA8P11142 646 aaKnown RBP16.13■□□□□ 0.17
RIPK3-206ENST00000557624 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
RIPK3-206ENST00000557624 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 HOXD10P28358 340 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 SREBF1P36956 1147 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 ARHGAP4P98171 946 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 ARHGEF6Q15052 776 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 PGM5Q15124 567 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 FOXD4L6Q3SYB3 417 aaPredicted RBP16.13■□□□□ 0.17
RIPK3-206ENST00000557624 FOXD4L3Q6VB84 417 aaPredicted RBP16.13■□□□□ 0.17
RIPK3-206ENST00000557624 BRAPQ7Z569 592 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 USP6NLQ92738 828 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
RIPK3-206ENST00000557624 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
RIPK3-206ENST00000557624 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 MAML3Q96JK9 1138 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
RIPK3-206ENST00000557624 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 FRMPD4Q14CM0 1322 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 GNRH1P01148 92 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 NR3C2P08235 984 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 HOXC6P09630 235 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
RIPK3-206ENST00000557624 LBX1P52954 281 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 PDE4DQ08499 809 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 CCL14Q16627 93 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 NEK8Q86SG6 692 aa16.12■□□□□ 0.17
RIPK3-206ENST00000557624 MPHOSPH6Q99547 160 aaKnown RBP16.12■□□□□ 0.17
RIPK3-206ENST00000557624 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
RIPK3-206ENST00000557624 DIS3Q9Y2L1 958 aaKnown RBP16.12■□□□□ 0.17
RIPK3-206ENST00000557624 CCND2P30279 289 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 PCNX4Q63HM2 1172 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 ARMCX2Q7L311 632 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 OTOP1Q7RTM1 612 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
RIPK3-206ENST00000557624 ASB14A6NK59 587 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 B4DLN1 442 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 WNT7AO00755 349 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 ZNF76P36508 570 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
RIPK3-206ENST00000557624 RAET1EQ8TD07 263 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 CRYGNQ8WXF5 182 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 RTEL1Q9NZ71 1219 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 FLRT1Q9NZU1 646 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 MYH15Q9Y2K3 1946 aa16.1■□□□□ 0.17
RIPK3-206ENST00000557624 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms