RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 KIAA1217Q5T5P2 1943 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 GOLGA8BA8MQT2 603 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 DNM1LO00429 736 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-211ENST00000557623 PLEKHA8P1O95397 391 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 ANAPC15P60006 121 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 RTN1Q16799 776 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 BRF1Q92994 677 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 AGXT2Q9BYV1 514 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 C11orf49Q9H6J7 331 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-211ENST00000557623 ALPK3Q96L96 1907 aa14.45□□□□□ -0.1
SLIRP-211ENST00000557623 ASTN1O14525 1302 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 CFBP00751 764 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 HSD17B4P51659 736 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 GHRHRQ02643 423 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 APOBRQ0VD83 1088 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 CCDC144BQ3MJ40 725 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 ANO1Q5XXA6 986 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 SYTL5Q8TDW5 730 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 NSUN6Q8TEA1 469 aaKnown RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 DIS3LQ8TF46 1054 aaKnown RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 PURBQ96QR8 312 aaKnown RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 KATNBL1Q9H079 304 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 VTA1Q9NP79 307 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 XPNPEP3Q9NQH7 507 aa14.44□□□□□ -0.1
SLIRP-211ENST00000557623 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
SLIRP-211ENST00000557623 KBTBD13C9JR72 458 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 GCOM1H8Y6P7 765 aaPredicted RBP14.43□□□□□ -0.1
SLIRP-211ENST00000557623 DUSP11O75319 330 aaKnown RBP14.43□□□□□ -0.1
SLIRP-211ENST00000557623 POLR2MP0CAP2 368 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 METAP2P50579 478 aaKnown RBP eCLIP14.43□□□□□ -0.17e-8■□□□□ 9.9
SLIRP-211ENST00000557623 PDE4DQ08499 809 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 RNF180Q86T96 592 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 CMTR1Q8N1G2 835 aaKnown RBP14.43□□□□□ -0.1
SLIRP-211ENST00000557623 TBC1D5Q92609 795 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 IWS1Q96ST2 819 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 SPC25Q9HBM1 224 aa14.43□□□□□ -0.1
SLIRP-211ENST00000557623 OPLAHO14841 1288 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 COL6A1P12109 1028 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 EDNRBP24530 442 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 LRRC41Q15345 812 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 GJC2Q5T442 439 aaPredicted RBP14.42□□□□□ -0.1
SLIRP-211ENST00000557623 ARHGEF16Q5VV41 709 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 CCDC82Q8N4S0 544 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 DPF3Q92784 378 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 TAAR1Q96RJ0 339 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 RMDN3Q96TC7 470 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 NID2Q14112 1375 aa14.42□□□□□ -0.1
SLIRP-211ENST00000557623 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 EVCP57679 992 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 TAPT1Q6NXT6 567 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
SLIRP-211ENST00000557623 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
SLIRP-211ENST00000557623 CUL5Q93034 780 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
SLIRP-211ENST00000557623 PDRG1Q9NUG6 133 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
SLIRP-211ENST00000557623 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 PGK1P00558 417 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 CDC27P30260 824 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 ADCYAP1R1P41586 468 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 STXBP2Q15833 593 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 IL17RAQ96F46 866 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 TSEN34Q9BSV6 310 aaKnown RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
SLIRP-211ENST00000557623 Q9Y3F1 56 aa14.4□□□□□ -0.1
SLIRP-211ENST00000557623 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 EVI5O60447 810 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 CST5P28325 142 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 HOXA13P31271 388 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 GJA9P57773 515 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 FUT2Q10981 343 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 TOB2Q14106 344 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 HEATR3Q7Z4Q2 680 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 PCSK9Q8NBP7 692 aaKnown RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 KLHDC9Q8NEP7 349 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 SMARCC2Q8TAQ2 1214 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 SCFD2Q8WU76 684 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms