RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 ADCY9O60503 1353 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 IL17REQ8NFR9 667 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 MRPL47Q9HD33 250 aaKnown RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 KMT5AQ9NQR1 393 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 ZHX1Q9UKY1 873 aaPredicted RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 ABCC3O15438 1527 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 ATP11AP98196 1134 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 PSMC2P35998 433 aaKnown RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 TRPV6Q9H1D0 765 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 MCPH1Q8NEM0 835 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 OR8K1Q8NGG5 319 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 KLHDC4Q8TBB5 520 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 USP44Q9H0E7 712 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 TECP42680 631 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 NEDD9Q14511 834 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 LRRC4Q9HBW1 653 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 DISC1Q9NRI5 854 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
CHD8-213ENST00000557364 AFF2P51816 1311 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 ITKQ08881 620 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 SEPT14Q6ZU15 432 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
CHD8-213ENST00000557364 DHTKD1Q96HY7 919 aaPredicted RBP9.12□□□□□ -0.95
CHD8-213ENST00000557364 TMEM106CQ9BVX2 250 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 LSM14BQ9BX40 385 aaKnown RBP9.12□□□□□ -0.95
CHD8-213ENST00000557364 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 EFHBQ8N7U6 833 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.12□□□□□ -0.959e-7■■■□□ 15.2
CHD8-213ENST00000557364 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.12□□□□□ -0.95
CHD8-213ENST00000557364 IQGAP3Q86VI3 1631 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 PHLDB2Q86SQ0 1253 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 MICAL1Q8TDZ2 1067 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 TBC1D7Q9P0N9 293 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 IGBP1P78318 339 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 NEK9Q8TD19 979 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 ASAP1Q9ULH1 1129 aa9.12□□□□□ -0.95
CHD8-213ENST00000557364 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 CA4P22748 312 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 BAG5Q9UL15 447 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 TBC1D8O95759 1140 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 FGAP02671 866 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 KRT15P19012 456 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 CMA1P23946 247 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 MYL7Q01449 175 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 PPP2R5DQ14738 602 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RCSD1Q6JBY9 416 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RPUSD2Q8IZ73 545 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 NCOA5Q9HCD5 579 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 CEP104O60308 925 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 ADAM9Q13443 819 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 NELFCDQ8IXH7 590 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 SDR42E1Q8WUS8 393 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 RPF1Q9H9Y2 349 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 VCX3AQ9NNX9 186 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 HERC5Q9UII4 1024 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 KCNJ18B7U540 433 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 DLATP10515 647 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 ARL4AP40617 200 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 KCNJ12Q14500 433 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 STXBP2Q15833 593 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 ARHGAP44Q17R89 818 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RNF219Q5W0B1 726 aaPredicted RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 GSDMAQ96QA5 445 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RLBP1P12271 317 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 EEF1GP26641 437 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 RRAGAQ7L523 313 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RBM46Q8TBY0 533 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 MTA3Q9BTC8 594 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RAD17O75943 681 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 PHKA2P46019 1235 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 RECQLP46063 649 aaPredicted RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
CHD8-213ENST00000557364 SCYL2Q6P3W7 929 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 SIX6OS1Q8N1H7 587 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 NME8Q8N427 588 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 C2orf40Q9H1Z8 148 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
CHD8-213ENST00000557364 HSPA6P17066 643 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 RCAN1P53805 252 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SESTD1Q86VW0 696 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SLF1Q9BQI6 1058 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms