RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 SMPD1P17405 629 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 EIF2AK2P19525 551 aaKnown RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 EDNRBP24530 442 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 CPT1AP50416 773 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 AKAP17AQ02040 695 aaKnown RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 TAPT1Q6NXT6 567 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 KCNV1Q6PIU1 500 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 TMTC3Q6ZXV5 915 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 CCDC82Q8N4S0 544 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 SRBD1Q8N5C6 995 aaKnown RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 KLHDC9Q8NEP7 349 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 SEZ6LQ9BYH1 1024 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 PXMP2Q9NR77 195 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 PDGFCQ9NRA1 345 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 ZMYND8Q9ULU4 1186 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 GNEQ9Y223 722 aaKnown RBP15.93■□□□□ 0.14
VPS33B-206ENST00000557358 ASTN1O14525 1302 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 ELP1O95163 1332 aa15.93■□□□□ 0.14
VPS33B-206ENST00000557358 LCTP09848 1927 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 DCDC2CA8MYV0 355 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-206ENST00000557358 ASGR1P07306 291 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 NR3C2P08235 984 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 TXNP10599 105 aaKnown RBP15.92■□□□□ 0.14
VPS33B-206ENST00000557358 CCND2P30279 289 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 GHRHRQ02643 423 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 C1orf53Q5VUE5 145 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 RAB11FIP4Q86YS3 637 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 OR6J1Q8NGC5 347 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 TBC1D5Q92609 795 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 BRF1Q92994 677 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 USP26Q9BXU7 913 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 EHMT1Q9H9B1 1298 aa15.92■□□□□ 0.14
VPS33B-206ENST00000557358 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
VPS33B-206ENST00000557358 A0A0U1RQG5 324 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 RBM47A0AV96 593 aaKnown RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 hCG_1984214I3L0E3 225 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 KPNA6O60684 536 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 HOXA13P31271 388 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 GNPTABQ3T906 1256 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 SEPT14Q6ZU15 432 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 RUFY3Q7L099 469 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 ZNF713Q8N859 430 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 GLT8D2Q9H1C3 349 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 PSTPIP2Q9H939 334 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 PRDM5Q9NQX1 630 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-206ENST00000557358 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 ALPK3Q96L96 1907 aa15.91■□□□□ 0.14
VPS33B-206ENST00000557358 STAM2O75886 525 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 SYN1P17600 705 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 NKX3-2P78367 333 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 SNX17Q15036 470 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 TRIM60Q495X7 471 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 TEX2Q8IWB9 1127 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
VPS33B-206ENST00000557358 FBXL16Q8N461 479 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 PDCD2LQ9BRP1 358 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 TM6SF1Q9BZW5 370 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 MRVI1Q9Y6F6 885 aa15.9■□□□□ 0.14
VPS33B-206ENST00000557358 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
VPS33B-206ENST00000557358 LRRC37A2A6NM11 1700 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 SPDYE3A6NKU9 549 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 ADCY6O43306 1168 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
VPS33B-206ENST00000557358 GH1P01241 217 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 BEX3Q00994 111 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 APOBRQ0VD83 1088 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
VPS33B-206ENST00000557358 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
VPS33B-206ENST00000557358 TOX2Q96NM4 488 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 COL20A1Q9P218 1284 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 BRPF3Q9ULD4 1205 aa15.89■□□□□ 0.13
VPS33B-206ENST00000557358 A0A1W2PPC1 479 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 MYADML2A6NDP7 307 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 PIK3CDO00329 1044 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 OPLAHO14841 1288 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 CLTBP09497 229 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 CPA1P15085 419 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 NAPAP54920 295 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 ANAPC15P60006 121 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 TLE2Q04725 743 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 PGM5Q15124 567 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-206ENST00000557358 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 XRRA1Q6P2D8 792 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 ZSWIM6Q9HCJ5 1215 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 COLQQ9Y215 455 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms