RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 PTPN11Q06124 597 aaPredicted RBP14.5□□□□□ -0.09
SNX6-209ENST00000557265 GRB10Q13322 594 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 BFSP2Q13515 415 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 SCFD2Q8WU76 684 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 HLA-CQ95604 372 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 MPHOSPH6Q99547 160 aaKnown RBP14.5□□□□□ -0.09
SNX6-209ENST00000557265 TMEM47Q9BQJ4 181 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 TOMM22Q9NS69 142 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 FGRP09769 529 aa14.49□□□□□ -0.09
SNX6-209ENST00000557265 EDNRBP24530 442 aa14.49□□□□□ -0.09
SNX6-209ENST00000557265 RRP12Q5JTH9 1297 aaKnown RBP14.49□□□□□ -0.09
SNX6-209ENST00000557265 SPRED2Q7Z698 418 aa14.49□□□□□ -0.09
SNX6-209ENST00000557265 LRFN3Q9BTN0 628 aa14.49□□□□□ -0.09
SNX6-209ENST00000557265 LPXNO60711 386 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 BAIAP3O94812 1187 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 PTGISQ16647 500 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 DNERQ8NFT8 737 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 PNMA2Q9UL42 364 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 LRRC37A2A6NM11 1700 aa14.48□□□□□ -0.09
SNX6-209ENST00000557265 B4DLN1 442 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 ARIH2O95376 493 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 PDHBP11177 359 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 MX1P20591 662 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 KCNJ6P48051 423 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 MRPL12P52815 198 aaKnown RBP14.47□□□□□ -0.09
SNX6-209ENST00000557265 ALX1Q15699 326 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 TMCO2Q7Z6W1 182 aaPredicted RBP14.47□□□□□ -0.09
SNX6-209ENST00000557265 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
SNX6-209ENST00000557265 GBF1Q92538 1859 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 TCF20Q9UGU0 1960 aaKnown RBP14.46□□□□□ -0.09
SNX6-209ENST00000557265 LCHNA4D1U4 455 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
SNX6-209ENST00000557265 WDR5P61964 334 aaKnown RBP14.46□□□□□ -0.09
SNX6-209ENST00000557265 ZNF543Q08ER8 600 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 GPNMBQ14956 572 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 TMEM31Q5JXX7 168 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 CAGE1Q8TC20 777 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 AFAP1L1Q8TED9 768 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 AFG1LQ8WV93 481 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 ZBED2Q9BTP6 218 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 HCN4Q9Y3Q4 1203 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 TRANK1O15050 2925 aa14.46□□□□□ -0.09
SNX6-209ENST00000557265 WDR19Q8NEZ3 1342 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 FGAP02671 866 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 SELPP16109 830 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 USH1GQ495M9 461 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
SNX6-209ENST00000557265 GDF6Q6KF10 455 aaPredicted RBP14.45□□□□□ -0.1
SNX6-209ENST00000557265 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 GDPD5Q8WTR4 605 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 KHSRPQ92945 711 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNX6-209ENST00000557265 ARIH1Q9Y4X5 557 aaPredicted RBP14.45□□□□□ -0.1
SNX6-209ENST00000557265 PCDHB15Q9Y5E8 787 aa14.45□□□□□ -0.1
SNX6-209ENST00000557265 GH1P01241 217 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 MMP3P08254 477 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 SNHG28P0DPA3 235 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 DEFB103AP81534 67 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 SEPT14Q6ZU15 432 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 LRRC8DQ7L1W4 858 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 CHST3Q7LGC8 479 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 SESTD1Q86VW0 696 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 RGS22Q8NE09 1264 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 DHX38Q92620 1227 aaKnown RBP14.44□□□□□ -0.1
SNX6-209ENST00000557265 KAT2BQ92831 832 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 LMCD1Q9NZU5 365 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 MTUS1Q9ULD2 1270 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 REV3LO60673 3130 aa14.44□□□□□ -0.1
SNX6-209ENST00000557265 NBNO60934 754 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 GOLGA8HP0CJ92 632 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 CASTP20810 708 aaKnown RBP14.43□□□□□ -0.1
SNX6-209ENST00000557265 HAND2P61296 217 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 TCTN1Q2MV58 587 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 CNKSR3Q6P9H4 555 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 TBC1D5Q92609 795 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 EVI5LQ96CN4 794 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 TTC14Q96N46 770 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 TAAR1Q96RJ0 339 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 RAD9AQ99638 391 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 CPVLQ9H3G5 476 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 SUGCTQ9HAC7 445 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 C11orf16Q9NQ32 467 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 LCTP09848 1927 aa14.43□□□□□ -0.1
SNX6-209ENST00000557265 SCN10AQ9Y5Y9 1956 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 FAM86C2PA6NEL3 165 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 RBAK-RBAKDNI3L0D1 243 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 GPR37L1O60883 481 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 GJB5O95377 273 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 PARNO95453 639 aaKnown RBP14.42□□□□□ -0.1
SNX6-209ENST00000557265 CXCL10P02778 98 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
SNX6-209ENST00000557265 CKBP12277 381 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 RBL2Q08999 1139 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms