RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SMIM22K7EJ46 135 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 SNAI1O95863 264 aaPredicted RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 PGK1P00558 417 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 RAG1P15918 1043 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 TAL1P17542 331 aaPredicted RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 ACLYP53396 1101 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 NKX3-2P78367 333 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 FPGSQ05932 587 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 SNRNP48Q6IEG0 339 aaKnown RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 CCSAPQ6IQ19 270 aaPredicted RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 PCSK9Q8NBP7 692 aaKnown RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 CHST13Q8NET6 341 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 APPBP2Q92624 585 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 GPATCH3Q96I76 525 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 ABHD16BQ9H3Z7 469 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 SPC25Q9HBM1 224 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 SLC38A10Q9HBR0 1119 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 STARD7Q9NQZ5 370 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
VRK1-206ENST00000557222 PLXNA1Q9UIW2 1896 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 NCOR1O75376 2440 aa10.33□□□□□ -0.76
VRK1-206ENST00000557222 RNF113AO15541 343 aaKnown RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 NDUFB10O96000 172 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 TIMP1P01033 207 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 ITGB8P26012 769 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 CDK7P50613 346 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 GJA9P57773 515 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 ZNF444Q8N0Y2 327 aaPredicted RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 MAFAQ8NHW3 353 aaPredicted RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 ZNF775Q96BV0 537 aaPredicted RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 RNPC3Q96LT9 517 aaKnown RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 FAM161BQ96MY7 647 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 SEZ6LQ9BYH1 1024 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 UPF3AQ9H1J1 476 aaKnown RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 TTYH1Q9H313 450 aaPredicted RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
VRK1-206ENST00000557222 SYNRGQ9UMZ2 1314 aa10.32□□□□□ -0.76
VRK1-206ENST00000557222 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
VRK1-206ENST00000557222 RAD21O60216 631 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 PLA2G6O60733 806 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 PQBP1O60828 265 aaKnown RBP10.31□□□□□ -0.76
VRK1-206ENST00000557222 TTLL1O95922 423 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 CHGBP05060 677 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 KCNA10Q16322 511 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 MFSD5Q6N075 450 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 ARMC2Q8NEN0 867 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 FAM174AQ8TBP5 190 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 DCTPP1Q9H773 170 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 ATP13A2Q9NQ11 1180 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 RCAN3Q9UKA8 241 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 RIPK3Q9Y572 518 aa10.31□□□□□ -0.76
VRK1-206ENST00000557222 PLIN4Q96Q06 1357 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 ARVCFO00192 962 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 GPAA1O43292 621 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 CABYRO75952 493 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
VRK1-206ENST00000557222 EPHB4P54760 987 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 PDE4BQ07343 736 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 PPIGQ13427 754 aaKnown RBP eCLIP10.3□□□□□ -0.767e-6■■□□□ 12.3
VRK1-206ENST00000557222 TKFCQ3LXA3 575 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
VRK1-206ENST00000557222 FAM160B2Q86V87 743 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 ANKRD35Q8N283 1001 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 NEDD1Q8NHV4 660 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 CHURC1Q8WUH1 139 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
VRK1-206ENST00000557222 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 ZHX1Q9UKY1 873 aaPredicted RBP10.3□□□□□ -0.76
VRK1-206ENST00000557222 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 CHD9Q3L8U1 2897 aa10.3□□□□□ -0.76
VRK1-206ENST00000557222 A0A0U1RQG5 324 aaPredicted RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 ASB14A6NK59 587 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 TLR3O15455 904 aaKnown RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 SMARCA5O60264 1052 aaPredicted RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 BMP3P12645 472 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 FOSL2P15408 326 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 TDO2P48775 406 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 AGERQ15109 404 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 GNASQ5JWF2 1037 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 CCDC129Q6ZRS4 1044 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 ARMCX2Q7L311 632 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 BPHLQ86WA6 291 aaPredicted RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 IFNL3Q8IZI9 196 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 TMEM199Q8N511 208 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms