RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 DNERQ8NFT8 737 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 SLC28A3Q9HAS3 691 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 TOMM22Q9NS69 142 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 SLC4A7Q9Y6M7 1214 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 CCDC171Q6TFL3 1326 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 XIRP2A4UGR9 3374 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 PFKMP08237 780 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 MYL3P08590 195 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 CALML3P27482 149 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 TTLL4Q14679 1199 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 NBPF20Q3BBV1 942 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 COPS5Q92905 334 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 ASB2Q96Q27 587 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 NEDD4P46934 1319 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 REV3LO60673 3130 aa12.57□□□□□ -0.4
HNRNPC-230ENST00000557201 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 ARIH2O95376 493 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 ATP2A2P16615 1042 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PDE4DQ08499 809 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 MFSD6Q6ZSS7 791 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 DGKHQ86XP1 1220 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 ANKS1AQ92625 1134 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 CTAGE1Q96RT6 745 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 MAF1Q9H063 256 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 KPNA6O60684 536 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 IQCF3P0C7M6 154 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 PPP1R13LQ8WUF5 828 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
HNRNPC-230ENST00000557201 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 GOLGA8HP0CJ92 632 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 TXNP10599 105 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 SDSP20132 328 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 IGFBP4P22692 258 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 RFC2P35250 354 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 NT5C2P49902 561 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 MRPS5P82675 430 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 GPNMBQ14956 572 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 CCDC85BQ15834 202 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 ESR2Q92731 530 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 UBA5Q9GZZ9 404 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
HNRNPC-230ENST00000557201 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 ZBBXA8MT70 800 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 ARHGEF15O94989 841 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 USH1GQ495M9 461 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 KAT2BQ92831 832 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 RAD50Q92878 1312 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 TANC1Q9C0D5 1861 aa12.54□□□□□ -0.4
HNRNPC-230ENST00000557201 LAMA4Q16363 1823 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 B4DLN1 442 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 CA3P07451 260 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 GSPT1P15170 499 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 MRPL12P52815 198 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 ARHGAP1Q07960 439 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 RBL2Q08999 1139 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 CDC37Q16543 378 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 ADGRF4Q8IZF3 695 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
HNRNPC-230ENST00000557201 ABCB11O95342 1321 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 RFXAPO00287 272 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 ZNF213O14771 459 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 KDM4AO75164 1064 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 MMP3P08254 477 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 ACTN1P12814 892 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms