RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 A0A1W2PPZ6 126 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-223ENST00000557076 HSP90B1P14625 803 aaKnown RBP6.16□□□□□ -1.42
SCFD1-223ENST00000557076 ADMP35318 185 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 KIF22Q14807 665 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 POU4F3Q15319 338 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 DACT2Q5SW24 774 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
SCFD1-223ENST00000557076 STRIP1Q5VSL9 837 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCFD1-223ENST00000557076 GALNT12Q8IXK2 581 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 ASIC4Q96FT7 647 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 FAM89AQ96GI7 184 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 CLMNQ96JQ2 1002 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 THUMPD2Q9BTF0 503 aaKnown RBP6.16□□□□□ -1.42
SCFD1-223ENST00000557076 ACTL7BQ9Y614 415 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 MYO3BQ8WXR4 1341 aa6.16□□□□□ -1.42
SCFD1-223ENST00000557076 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 SPTBN5Q9NRC6 3674 aaKnown RBP6.15□□□□□ -1.42
SCFD1-223ENST00000557076 TLR2O60603 784 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 WDHD1O75717 1129 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-223ENST00000557076 NEFLP07196 543 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 HSPA5P11021 654 aaKnown RBP6.15□□□□□ -1.42
SCFD1-223ENST00000557076 JUNBP17275 347 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-223ENST00000557076 MAOBP27338 520 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 HOXD10P28358 340 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 ANKRD13AQ8IZ07 590 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 SHISA5Q8N114 240 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 XAGE3Q8WTP9 111 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 GATA6Q92908 595 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 GDF15Q99988 308 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 LIN7BQ9HAP6 207 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 ZCCHC17Q9NP64 241 aaKnown RBP6.15□□□□□ -1.42
SCFD1-223ENST00000557076 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
SCFD1-223ENST00000557076 A0A1W2PP55 124 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 FAM170BA6NMN3 283 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 IRS4O14654 1257 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 SGPL1O95470 568 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 U2AF1L5P0DN76 240 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 EIF2S2P20042 333 aaKnown RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 RAB6AP20340 208 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 GRK4P32298 578 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 GTF2A2P52657 109 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 LACTBP83111 547 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 U2AF1Q01081 240 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 AIMP1Q12904 312 aaKnown RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 FZD5Q13467 585 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 TAF1CQ15572 869 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 PROSER3Q2NL68 480 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 TTLL5Q6EMB2 1281 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 FAM109BQ6ICB4 259 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-223ENST00000557076 NFXL1Q6ZNB6 911 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 Q7L0L9 218 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 FLCNQ8NFG4 579 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 CFAP53Q96M91 514 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 TCF12Q99081 682 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 CORO1BQ9BR76 489 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 ISCA1Q9BUE6 129 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 COA1Q9GZY4 146 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 RAD18Q9NS91 495 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 BABAM1Q9NWV8 329 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 FZD1Q9UP38 647 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 DUOX1Q9NRD9 1551 aa6.14□□□□□ -1.43
SCFD1-223ENST00000557076 SIPA1L3O60292 1781 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 RBBP6Q7Z6E9 1792 aaKnown RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 NUP98P52948 1817 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 FARP2O94887 1054 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 ABL1P00519 1130 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 ANXA1P04083 346 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 POLR3DP05423 398 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 NFICP08651 508 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 CCL5P13501 91 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 GRIA4P48058 902 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 ZNF423Q2M1K9 1284 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 NBPF12Q5TAG4 269 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 DYMQ7RTS9 669 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 PLBD2Q8NHP8 589 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 U2AF1L4Q8WU68 220 aaKnown RBP6.13□□□□□ -1.43
SCFD1-223ENST00000557076 BRI3BPQ8WY22 251 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 OPTNQ96CV9 577 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 MXD3Q9BW11 206 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 ARHGAP39Q9C0H5 1083 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 SEMA6CQ9H3T2 930 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 ACSS3Q9H6R3 686 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 SRRDQ9UH36 339 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 AP4E1Q9UPM8 1137 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 RIPOR2Q9Y4F9 1068 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 XDHP47989 1333 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 EYSQ5T1H1 3165 aa6.13□□□□□ -1.43
SCFD1-223ENST00000557076 CCL15-CCL14A0A0B4J2E2 113 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 SASH1O94885 1247 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 B3GALT4O96024 378 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 CTSBP07858 339 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 ITGB5P18084 799 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 PSMC4P43686 418 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 UBXN2AP68543 259 aa6.12□□□□□ -1.43
SCFD1-223ENST00000557076 DLGAP5Q15398 846 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms