RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 KLHDC9Q8NEP7 349 aa26.4■■□□□ 1.82
TDP1-216ENST00000556867 UPF3BQ9BZI7 483 aaKnown RBP26.4■■□□□ 1.82
TDP1-216ENST00000556867 PXMP2Q9NR77 195 aa26.4■■□□□ 1.82
TDP1-216ENST00000556867 PHF24Q9UPV7 400 aa26.4■■□□□ 1.82
TDP1-216ENST00000556867 CCDC196A0A1B0GTZ2 297 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 hCG_1642624A0A1W2PR95 340 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 EVI5O60447 810 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 SMPD1P17405 629 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 HOXA13P31271 388 aaPredicted RBP26.39■■□□□ 1.82
TDP1-216ENST00000556867 TOB2Q14106 344 aaPredicted RBP26.39■■□□□ 1.82
TDP1-216ENST00000556867 ARHGEF16Q5VV41 709 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 IL17RAQ96F46 866 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 TSEN34Q9BSV6 310 aaKnown RBP26.39■■□□□ 1.82
TDP1-216ENST00000556867 SPC25Q9HBM1 224 aa26.39■■□□□ 1.82
TDP1-216ENST00000556867 KIAA1217Q5T5P2 1943 aa26.39■■□□□ 1.81
TDP1-216ENST00000556867 CCSAPQ6IQ19 270 aaPredicted RBP26.38■■□□□ 1.81
TDP1-216ENST00000556867 NR2E3Q9Y5X4 410 aa26.38■■□□□ 1.81
TDP1-216ENST00000556867 MYADML2A6NDP7 307 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 SEC24BO95487 1268 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 C6orf222P0C671 652 aaPredicted RBP26.37■■□□□ 1.81
TDP1-216ENST00000556867 EIF2AK2P19525 551 aaKnown RBP26.37■■□□□ 1.81
TDP1-216ENST00000556867 LRRC26Q2I0M4 334 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 DUSP28Q4G0W2 176 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 NOL8Q76FK4 1167 aaKnown RBP26.37■■□□□ 1.81
TDP1-216ENST00000556867 TLK2Q86UE8 772 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 WDR11Q9BZH6 1224 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 Q9Y3F1 56 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 DNAH12Q6ZR08 3092 aa26.37■■□□□ 1.81
TDP1-216ENST00000556867 PIK3CDO00329 1044 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 CTAGE5O15320 804 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 NR3C2P08235 984 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 ADD1P35611 737 aaKnown RBP26.36■■□□□ 1.81
TDP1-216ENST00000556867 STXBP2Q15833 593 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 C8orf34Q49A92 452 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 SCFD2Q8WU76 684 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 PDCD2LQ9BRP1 358 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 PDRG1Q9NUG6 133 aa26.36■■□□□ 1.81
TDP1-216ENST00000556867 MOXD2PA6NHM9 499 aa26.35■■□□□ 1.81
TDP1-216ENST00000556867 PDIA3P30101 505 aaKnown RBP26.35■■□□□ 1.81
TDP1-216ENST00000556867 HEATR3Q7Z4Q2 680 aa26.35■■□□□ 1.81
TDP1-216ENST00000556867 FCHSD1Q86WN1 690 aa26.35■■□□□ 1.81
TDP1-216ENST00000556867 V9GY48 417 aaPredicted RBP26.35■■□□□ 1.81
TDP1-216ENST00000556867 FRMPD4Q14CM0 1322 aa26.35■■□□□ 1.81
TDP1-216ENST00000556867 H0YGN5 161 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 ACLYP53396 1101 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 IRX5P78411 483 aaPredicted RBP26.34■■□□□ 1.81
TDP1-216ENST00000556867 KCNA10Q16322 511 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 TMEM63BQ5T3F8 832 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 WWC2Q6AWC2 1192 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 PCSK9Q8NBP7 692 aaKnown RBP26.34■■□□□ 1.81
TDP1-216ENST00000556867 GPKOWQ92917 476 aaPredicted RBP eCLIP26.34■■□□□ 1.81
TDP1-216ENST00000556867 CUL5Q93034 780 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 FERMT2Q96AC1 680 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 AP5M1Q9H0R1 490 aa26.34■■□□□ 1.81
TDP1-216ENST00000556867 A0A1W2PQ45 241 aaPredicted RBP26.33■■□□□ 1.81
TDP1-216ENST00000556867 A0A1W2PQY0 241 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 hCG_1984214I3L0E3 225 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 MEIS2O14770 477 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 NKRFO15226 690 aaKnown RBP eCLIP26.33■■□□□ 1.81
TDP1-216ENST00000556867 EIF3JO75822 258 aaKnown RBP26.33■■□□□ 1.81
TDP1-216ENST00000556867 PTGS1P23219 599 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 ATN1P54259 1190 aaPredicted RBP26.33■■□□□ 1.81
TDP1-216ENST00000556867 SNX17Q15036 470 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 PGM5Q15124 567 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 GNASQ5JWF2 1037 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 PPP1R18Q6NYC8 613 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 SLC39A5Q6ZMH5 540 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 C7orf61Q8IZ16 206 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 ZNF713Q8N859 430 aaPredicted RBP26.33■■□□□ 1.81
TDP1-216ENST00000556867 PSTPIP2Q9H939 334 aa26.33■■□□□ 1.81
TDP1-216ENST00000556867 DYNC1LI2O43237 492 aaPredicted RBP26.32■■□□□ 1.8
TDP1-216ENST00000556867 TTLL4Q14679 1199 aa26.32■■□□□ 1.8
TDP1-216ENST00000556867 C1orf53Q5VUE5 145 aa26.32■■□□□ 1.8
TDP1-216ENST00000556867 USP17L6PQ6QN14 398 aa26.32■■□□□ 1.8
TDP1-216ENST00000556867 IL31RAQ8NI17 732 aa26.32■■□□□ 1.8
TDP1-216ENST00000556867 SMARCC2Q8TAQ2 1214 aa26.32■■□□□ 1.8
TDP1-216ENST00000556867 ZNF274Q96GC6 653 aaPredicted RBP26.32■■□□□ 1.8
TDP1-216ENST00000556867 ALDH8A1Q9H2A2 487 aaPredicted RBP26.32■■□□□ 1.8
TDP1-216ENST00000556867 NTRK3Q16288 839 aa26.31■■□□□ 1.8
TDP1-216ENST00000556867 FSCN1Q16658 493 aaKnown RBP26.31■■□□□ 1.8
TDP1-216ENST00000556867 CCDC62Q6P9F0 684 aa26.31■■□□□ 1.8
TDP1-216ENST00000556867 VSIG10LQ86VR7 867 aa26.31■■□□□ 1.8
TDP1-216ENST00000556867 TEX2Q8IWB9 1127 aa26.31■■□□□ 1.8
TDP1-216ENST00000556867 RBM27Q9P2N5 1060 aaKnown RBP26.31■■□□□ 1.8
TDP1-216ENST00000556867 ARIH2O95376 493 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 ASGR1P07306 291 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 TXNP10599 105 aaKnown RBP26.3■■□□□ 1.8
TDP1-216ENST00000556867 CCND2P30279 289 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 RTP1P59025 263 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 BEX3Q00994 111 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 TYW1BQ6NUM6 668 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 SEPT14Q6ZU15 432 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 BARHL2Q9NY43 387 aa26.3■■□□□ 1.8
TDP1-216ENST00000556867 STXBP3O00186 592 aa26.29■■□□□ 1.8
TDP1-216ENST00000556867 MYCLP12524 364 aaPredicted RBP26.29■■□□□ 1.8
TDP1-216ENST00000556867 IFNAR1P17181 557 aa26.29■■□□□ 1.8
TDP1-216ENST00000556867 NAPAP54920 295 aa26.29■■□□□ 1.8
TDP1-216ENST00000556867 CCT2P78371 535 aaKnown RBP26.29■■□□□ 1.8
TDP1-216ENST00000556867 PFKFB3Q16875 520 aaPredicted RBP26.29■■□□□ 1.8
TDP1-216ENST00000556867 OR6J1Q8NGC5 347 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms