RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 RAD50Q92878 1312 aa17.33■□□□□ 0.36
CHD8-211ENST00000556833 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 KDM4AO75164 1064 aa17.33■□□□□ 0.36
CHD8-211ENST00000556833 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
CHD8-211ENST00000556833 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHD8-211ENST00000556833 PRRC2BQ5JSZ5 2229 aaKnown RBP17.33■□□□□ 0.36
CHD8-211ENST00000556833 ZMYM6O95789 1325 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 B4E1Z4 1266 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 SORBS3O60504 671 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 CA3P07451 260 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 SDSP20132 328 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 SKIV2LQ15477 1246 aaKnown RBP17.32■□□□□ 0.36
CHD8-211ENST00000556833 LY6KQ17RY6 165 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 BRDTQ58F21 947 aaPredicted RBP17.32■□□□□ 0.36
CHD8-211ENST00000556833 KRT40Q6A162 431 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 ESR2Q92731 530 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
CHD8-211ENST00000556833 TAAR1Q96RJ0 339 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 VAT1LQ9HCJ6 419 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 NOD1Q9Y239 953 aa17.32■□□□□ 0.36
CHD8-211ENST00000556833 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 TNFRSF10AO00220 468 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 ZNF213O14771 459 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 ARHGEF15O94989 841 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 SNHG28P0DPA3 235 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 EDNRBP24530 442 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
CHD8-211ENST00000556833 PNMA1Q8ND90 353 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 AFG1LQ8WV93 481 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
CHD8-211ENST00000556833 MPHOSPH6Q99547 160 aaKnown RBP17.31■□□□□ 0.36
CHD8-211ENST00000556833 KAT14Q9H8E8 782 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 RAPGEFL1Q9UHV5 662 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 PCDHA11Q9Y5I1 949 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
CHD8-211ENST00000556833 TRANK1O15050 2925 aa17.31■□□□□ 0.36
CHD8-211ENST00000556833 EPOPA6NHQ4 379 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 TFF2Q03403 129 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 SPRED2Q7Z698 418 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 ADGRF4Q8IZF3 695 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 RETREG2Q8NC44 543 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 DNERQ8NFT8 737 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 TTC14Q96N46 770 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 ASB2Q96Q27 587 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 SEZ6LQ9BYH1 1024 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
CHD8-211ENST00000556833 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
CHD8-211ENST00000556833 NCOR1O75376 2440 aa17.29■□□□□ 0.36
CHD8-211ENST00000556833 NKRFO15226 690 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHD8-211ENST00000556833 IQCF3P0C7M6 154 aa17.29■□□□□ 0.36
CHD8-211ENST00000556833 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
CHD8-211ENST00000556833 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
CHD8-211ENST00000556833 TMEM67Q5HYA8 995 aa17.29■□□□□ 0.36
CHD8-211ENST00000556833 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
CHD8-211ENST00000556833 ARNTL2Q8WYA1 636 aa17.29■□□□□ 0.36
CHD8-211ENST00000556833 BDP1A6H8Y1 2624 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 A6NJR5 290 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 IGHDP01880 384 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 MMP3P08254 477 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 ACTN1P12814 892 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 PTGISQ16647 500 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 IQCA1Q86XH1 822 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 PLEKHM2Q8IWE5 1019 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
CHD8-211ENST00000556833 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
CHD8-211ENST00000556833 ABCB11O95342 1321 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 PFKMP08237 780 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 ZNF286BP0CG31 522 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 ARHGAP1Q07960 439 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 ENAHQ8N8S7 591 aaPredicted RBP17.27■□□□□ 0.36
CHD8-211ENST00000556833 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
CHD8-211ENST00000556833 ZSCAN10Q96SZ4 725 aaPredicted RBP17.27■□□□□ 0.36
CHD8-211ENST00000556833 RMDN3Q96TC7 470 aa17.27■□□□□ 0.36
CHD8-211ENST00000556833 B4DLN1 442 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 CFBP00751 764 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 GH1P01241 217 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
CHD8-211ENST00000556833 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
CHD8-211ENST00000556833 KCNQ1P51787 676 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms