RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 PFKFB3Q16875 520 aaPredicted RBP28.3■■■□□ 2.12
SDR39U1-221ENST00000556707 EEPD1Q7L9B9 569 aa28.3■■■□□ 2.12
SDR39U1-221ENST00000556707 CUL5Q93034 780 aa28.3■■■□□ 2.12
SDR39U1-221ENST00000556707 SLKQ9H2G2 1235 aaPredicted RBP28.3■■■□□ 2.12
SDR39U1-221ENST00000556707 PSTPIP2Q9H939 334 aa28.3■■■□□ 2.12
SDR39U1-221ENST00000556707 PIK3CDO00329 1044 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 MEIS2O14770 477 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 CPLX1O14810 134 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 PFKFB2O60825 505 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 SCG2P13521 617 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 EIF2AK2P19525 551 aaKnown RBP28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 MNX1P50219 401 aaPredicted RBP28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 AKAP17AQ02040 695 aaKnown RBP28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 TAPT1Q6NXT6 567 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 PPP1R18Q6NYC8 613 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 FCHSD1Q86WN1 690 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 BARHL2Q9NY43 387 aa28.29■■■□□ 2.12
SDR39U1-221ENST00000556707 STXBP3O00186 592 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 NAPAP54920 295 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 MLLT1Q03111 559 aaPredicted RBP28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 PKN1Q16512 942 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 TYW1BQ6NUM6 668 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 CPLX2Q6PUV4 134 aaKnown RBP28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 USP17L6PQ6QN14 398 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 SMARCC2Q8TAQ2 1214 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 LENG1Q96BZ8 264 aaPredicted RBP28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 SLC26A6Q9BXS9 759 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 BACH2Q9BYV9 841 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 PDGFCQ9NRA1 345 aa28.28■■■□□ 2.12
SDR39U1-221ENST00000556707 ADCY6O43306 1168 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 DUSP11O75319 330 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 NR3C2P08235 984 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 SCRN1Q12765 414 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 IQSEC1Q6DN90 963 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 NOL8Q76FK4 1167 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 ARRDC4Q8NCT1 418 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 PDCD2LQ9BRP1 358 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 XPNPEP3Q9NQH7 507 aa28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 TNRC18O15417 2968 aaPredicted RBP28.27■■■□□ 2.12
SDR39U1-221ENST00000556707 PPFIA3O75145 1194 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 ADCYAP1R1P41586 468 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 TNFAIP2Q03169 654 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 STXBP2Q15833 593 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 TEX2Q8IWB9 1127 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 TRIM22Q8IYM9 498 aa28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 DIS3LQ8TF46 1054 aaKnown RBP28.26■■■□□ 2.11
SDR39U1-221ENST00000556707 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 RBM47A0AV96 593 aaKnown RBP28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 SSRP1Q08945 709 aaKnown RBP28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 ME3Q16798 604 aa28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 PAWRQ96IZ0 340 aaKnown RBP28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 TBC1D32Q96NH3 1257 aa28.25■■■□□ 2.11
SDR39U1-221ENST00000556707 FRMPD4Q14CM0 1322 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 PGK1P00558 417 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 PGM5Q15124 567 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 RABEP1Q15276 862 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 LRRC41Q15345 812 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 NECAB2Q7Z6G3 386 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 RIC8AQ9NPQ8 531 aa28.24■■■□□ 2.11
SDR39U1-221ENST00000556707 SYNRGQ9UMZ2 1314 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 SMCO2A6NFE2 343 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 DNM1LO00429 736 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 EIF3JO75822 258 aaKnown RBP28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 CDKL5O76039 1030 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 LARGE1O95461 756 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 SMPD1P17405 629 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 ADCY7P51828 1080 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 UBE2SQ16763 222 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 VSIG10LQ86VR7 867 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 IL31RAQ8NI17 732 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 GLT8D2Q9H1C3 349 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 GNEQ9Y223 722 aaKnown RBP28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 MYH7BA7E2Y1 1941 aa28.23■■■□□ 2.11
SDR39U1-221ENST00000556707 ADAMTS4O75173 837 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 GJC2Q5T442 439 aaPredicted RBP28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 RNF180Q86T96 592 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 SCFD2Q8WU76 684 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 CCDC12Q8WUD4 166 aaPredicted RBP28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 WDR11Q9BZH6 1224 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 UPF3AQ9H1J1 476 aaKnown RBP28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 LIMCH1Q9UPQ0 1083 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 ALPK3Q96L96 1907 aa28.22■■■□□ 2.11
SDR39U1-221ENST00000556707 CEP290O15078 2479 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 ESYT2A0FGR8 921 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 KBTBD13C9JR72 458 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 DEXIO95424 95 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 MYCNP04198 464 aaPredicted RBP28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 MYCLP12524 364 aaPredicted RBP28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 CCND2P30279 289 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 DUSP28Q4G0W2 176 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 NECAB1Q8N987 351 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 GTF3C6Q969F1 213 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 C11orf49Q9H6J7 331 aa28.21■■■□□ 2.11
SDR39U1-221ENST00000556707 COL6A1P12109 1028 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 GJA9P57773 515 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 TMEM63BQ5T3F8 832 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 KLHDC9Q8NEP7 349 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 ZMYND12Q9H0C1 365 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 SPC25Q9HBM1 224 aa28.2■■■□□ 2.1
SDR39U1-221ENST00000556707 Q9Y3F1 56 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms