RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 BLOC1S2Q6QNY1 142 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 CWC27Q6UX04 472 aaKnown RBP7.15□□□□□ -1.26
CPSF2-205ENST00000556622 TPTE2Q6XPS3 522 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 GAS2L3Q86XJ1 694 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 ZGPATQ8N5A5 531 aaKnown RBP7.15□□□□□ -1.26
CPSF2-205ENST00000556622 PI4K2BQ8TCG2 481 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 LLPHQ9BRT6 129 aaKnown RBP7.15□□□□□ -1.26
CPSF2-205ENST00000556622 CLEC4MQ9H2X3 399 aaPredicted RBP7.15□□□□□ -1.26
CPSF2-205ENST00000556622 CHPF2Q9P2E5 772 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 NIP7Q9Y221 180 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPSF2-205ENST00000556622 MAP3K2Q9Y2U5 619 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 SNX14Q9Y5W7 946 aa7.15□□□□□ -1.26
CPSF2-205ENST00000556622 UBR2Q8IWV8 1755 aa7.15□□□□□ -1.27
CPSF2-205ENST00000556622 SYCE3A1L190 88 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 MEGF11A6BM72 1044 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ERVV-1B6SEH8 477 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 DYNC1I1O14576 645 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 NRDCO43847 1150 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 DHX16O60231 1041 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 F13A1P00488 732 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ANXA1P04083 346 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 CASTP20810 708 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 CHRNA5P30532 468 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 HOXA10P31260 410 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 PDE6BP35913 854 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ST5P78524 1137 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 C19orf57Q0VDD7 668 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 COL24A1Q17RW2 1714 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ZNF423Q2M1K9 1284 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 DALRD3Q5D0E6 543 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 LARP1BQ659C4 914 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 TTLL7Q6ZT98 887 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ARHGAP27Q6ZUM4 889 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 COPS6Q7L5N1 327 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 USP48Q86UV5 1035 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 NBPF5PQ86XG9 351 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 C2CD5Q86YS7 1000 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 MAP4K1Q92918 833 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ZNF622Q969S3 477 aaKnown RBP eCLIP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 DBNDD2Q9BQY9 259 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 NRSN2Q9GZP1 204 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 LSG1Q9H089 658 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 ABCB6Q9NP58 842 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 IL1RAPL2Q9NP60 686 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 GPR108Q9NPR9 543 aa7.14□□□□□ -1.27
CPSF2-205ENST00000556622 DDX19AQ9NUU7 478 aaKnown RBP7.14□□□□□ -1.27
CPSF2-205ENST00000556622 MAP3K15Q6ZN16 1313 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 NEMFO60524 1076 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ATP5JP18859 108 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 SYT1P21579 422 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 KCNA3P22001 575 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ARL4DP49703 201 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 AK2P54819 239 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 FGD1P98174 961 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 GRM2Q14416 872 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 NECTIN1Q15223 517 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 SASS6Q6UVJ0 657 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 DNAJC14Q6Y2X3 702 aaPredicted RBP7.13□□□□□ -1.27
CPSF2-205ENST00000556622 AACSQ86V21 672 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 POU5F2Q8N7G0 328 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 CNBD1Q8NA66 436 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 SHKBP1Q8TBC3 707 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 GPT2Q8TD30 523 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ASAP3Q8TDY4 903 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 UTP4Q969X6 686 aaKnown RBP7.13□□□□□ -1.27
CPSF2-205ENST00000556622 JAKMIP1Q96N16 626 aaKnown RBP7.13□□□□□ -1.27
CPSF2-205ENST00000556622 TTC14Q96N46 770 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 FSD1Q9BTV5 496 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 BRIP1Q9BX63 1249 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 NAT10Q9H0A0 1025 aaKnown RBP7.13□□□□□ -1.27
CPSF2-205ENST00000556622 EHD4Q9H223 541 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ZNF576Q9H609 170 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 PHAXQ9H814 394 aaKnown RBP7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ZFYVE1Q9HBF4 777 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 COPRSQ9NQ92 184 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 CTNNA3Q9UI47 895 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 KDM3BQ7LBC6 1761 aa7.13□□□□□ -1.27
CPSF2-205ENST00000556622 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 GIPC1O14908 333 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 B3GALT4O96024 378 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 TUBB4AP04350 444 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 ZFYP08048 801 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 NBPF7P0C2Y1 421 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 XRCC5P13010 732 aaKnown RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 GPTP24298 496 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 TPM4P67936 248 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 ZRSR1Q15695 479 aaKnown RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 PROSER3Q2NL68 480 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 DNTTIP2Q5QJE6 756 aaKnown RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 HGSNATQ68CP4 663 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 ALG1LQ6GMV1 187 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms