RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 ACLYP53396 1101 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 RCAN1P53805 252 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 RTP1P59025 263 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 SNX17Q15036 470 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 SLC39A5Q6ZMH5 540 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 CCDC82Q8N4S0 544 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 BRF1Q92994 677 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 PXMP2Q9NR77 195 aa20.33■□□□□ 0.85
TUBB3-212ENST00000556565 ZMYND8Q9ULU4 1186 aaPredicted RBP20.33■□□□□ 0.85
TUBB3-212ENST00000556565 CNTNAP5Q8WYK1 1306 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 MOXD2PA6NHM9 499 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 GCOM1H8Y6P7 765 aaPredicted RBP20.32■□□□□ 0.84
TUBB3-212ENST00000556565 POLR2MP0CAP2 368 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 EIF2AK2P19525 551 aaKnown RBP20.32■□□□□ 0.84
TUBB3-212ENST00000556565 KCNA10Q16322 511 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 DUSP28Q4G0W2 176 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 ARHGEF16Q5VV41 709 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 IWS1Q96ST2 819 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 WDR11Q9BZH6 1224 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 AP5M1Q9H0R1 490 aa20.32■□□□□ 0.84
TUBB3-212ENST00000556565 hCG_1642624A0A1W2PR95 340 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 PPP2R5BQ15173 497 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 GNASQ5JWF2 1037 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 FBXL16Q8N461 479 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 PCSK9Q8NBP7 692 aaKnown RBP20.31■□□□□ 0.84
TUBB3-212ENST00000556565 SCFD2Q8WU76 684 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 AGXT2Q9BYV1 514 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-212ENST00000556565 ATP11BQ9Y2G3 1177 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 Q9Y3F1 56 aa20.31■□□□□ 0.84
TUBB3-212ENST00000556565 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-212ENST00000556565 SYN1P17600 705 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 BEX3Q00994 111 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 FUT2Q10981 343 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 FSCN1Q16658 493 aaKnown RBP20.3■□□□□ 0.84
TUBB3-212ENST00000556565 TRIM60Q495X7 471 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 C1orf53Q5VUE5 145 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 FAM217BQ9NTX9 383 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-212ENST00000556565 NID2Q14112 1375 aa20.3■□□□□ 0.84
TUBB3-212ENST00000556565 ASGR1P07306 291 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 NR3C2P08235 984 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 METAP2P50579 478 aaKnown RBP eCLIP20.29■□□□□ 0.84
TUBB3-212ENST00000556565 STXBP2Q15833 593 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 CHRDL2Q6WN34 429 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 RUFY3Q7L099 469 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 FCHSD1Q86WN1 690 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 TM6SF1Q9BZW5 370 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
TUBB3-212ENST00000556565 ARIH2O95376 493 aa20.28■□□□□ 0.84
TUBB3-212ENST00000556565 CDC27P30260 824 aa20.28■□□□□ 0.84
TUBB3-212ENST00000556565 HEATR3Q7Z4Q2 680 aa20.28■□□□□ 0.84
TUBB3-212ENST00000556565 IL31RAQ8NI17 732 aa20.28■□□□□ 0.84
TUBB3-212ENST00000556565 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
TUBB3-212ENST00000556565 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-212ENST00000556565 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
TUBB3-212ENST00000556565 FRMPD4Q14CM0 1322 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 NKRFO15226 690 aaKnown RBP eCLIP20.27■□□□□ 0.845e-7■□□□□ 10.7
TUBB3-212ENST00000556565 EIF3JO75822 258 aaKnown RBP20.27■□□□□ 0.84
TUBB3-212ENST00000556565 TXNP10599 105 aaKnown RBP20.27■□□□□ 0.84
TUBB3-212ENST00000556565 TTLL4Q14679 1199 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 PGM5Q15124 567 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 SEPT14Q6ZU15 432 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 OR6J1Q8NGC5 347 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
TUBB3-212ENST00000556565 CUL5Q93034 780 aa20.27■□□□□ 0.84
TUBB3-212ENST00000556565 ELP1O95163 1332 aa20.27■□□□□ 0.83
TUBB3-212ENST00000556565 CCDC196A0A1B0GTZ2 297 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 PIK3CDO00329 1044 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 MEIS2O14770 477 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-212ENST00000556565 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
TUBB3-212ENST00000556565 TLE2Q04725 743 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-212ENST00000556565 WWC2Q6AWC2 1192 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 CCDC62Q6P9F0 684 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 USP17L6PQ6QN14 398 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 CXCL17Q6UXB2 119 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 SMARCC2Q8TAQ2 1214 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 COPS5Q92905 334 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 PRO3102Q9H379 93 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 PCDH10Q9P2E7 1040 aa20.26■□□□□ 0.83
TUBB3-212ENST00000556565 ZEB2O60315 1214 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
TUBB3-212ENST00000556565 CCND2P30279 289 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 CPT1AP50416 773 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 EVCP57679 992 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 VSIG10LQ86VR7 867 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 PSTPIP2Q9H939 334 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 PDLIM7Q9NR12 457 aa20.25■□□□□ 0.83
TUBB3-212ENST00000556565 V9GY48 417 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-212ENST00000556565 KIAA1217Q5T5P2 1943 aa20.24■□□□□ 0.83
TUBB3-212ENST00000556565 A0A0U1RQG5 324 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-212ENST00000556565 EIF5BO60841 1220 aaKnown RBP20.24■□□□□ 0.83
TUBB3-212ENST00000556565 CABYRO75952 493 aa20.24■□□□□ 0.83
TUBB3-212ENST00000556565 MAGEA10P43363 369 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms