RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-212ENST00000556541 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 F13A1P00488 732 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 IGHA2P01877 340 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 EDNRBP24530 442 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 HOXD10P28358 340 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 CIITAP33076 1130 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 RESTQ13127 1097 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.35
FOXN3-212ENST00000556541 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 USP17L6PQ6QN14 398 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 MAMDC4Q6UXC1 1216 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 NSMFQ6X4W1 530 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 SLC30A10Q6XR72 485 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
FOXN3-212ENST00000556541 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
FOXN3-212ENST00000556541 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
FOXN3-212ENST00000556541 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 GJD2Q9UKL4 321 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 ATP6V1DQ9Y5K8 247 aa12.87□□□□□ -0.35
FOXN3-212ENST00000556541 ZSWIM8A7E2V4 1837 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 CYP3A7-CYP3A51PA0A087WV96 503 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 TNPO2O14787 897 aaKnown RBP12.86□□□□□ -0.35
FOXN3-212ENST00000556541 PEX10O60683 326 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
FOXN3-212ENST00000556541 TAL1P17542 331 aaPredicted RBP12.86□□□□□ -0.35
FOXN3-212ENST00000556541 CYP3A7P24462 503 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 ADORA2AP29274 412 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 RGS2P41220 211 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 NR5A1Q13285 461 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 UBE2SQ16763 222 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 NIPA1Q7RTP0 329 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 FGD4Q96M96 766 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 MBOAT7Q96N66 472 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 APBA2Q99767 749 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 ZDHHC9Q9Y397 364 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 SYNGAP1Q96PV0 1343 aa12.86□□□□□ -0.35
FOXN3-212ENST00000556541 ASB14A6NK59 587 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 DTNBO60941 627 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-212ENST00000556541 PSMC4P43686 418 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 ALDH5A1P51649 535 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-212ENST00000556541 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 GNL2Q13823 731 aaKnown RBP12.85□□□□□ -0.35
FOXN3-212ENST00000556541 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-212ENST00000556541 NRBP1Q9UHY1 535 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
FOXN3-212ENST00000556541 MCM3APO60318 1980 aa12.85□□□□□ -0.35
FOXN3-212ENST00000556541 TCHHQ07283 1943 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 ADAMTS3O15072 1205 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 FOXN1O15353 648 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 MAFGO15525 162 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 COBLO75128 1261 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 BMP15O95972 392 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 CTGFP29279 349 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 PGM5Q15124 567 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 JAKMIP3Q5VZ66 844 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 VSIG10LQ86VR7 867 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-212ENST00000556541 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 SRRDQ9UH36 339 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 ASTN1O14525 1302 aa12.84□□□□□ -0.35
FOXN3-212ENST00000556541 NR3C2P08235 984 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 CCND2P30279 289 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 PKP1Q13835 747 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 RASGRP4Q8TDF6 673 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 TBCKQ8TEA7 893 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 TMEM260Q9NX78 707 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 UBIAD1Q9Y5Z9 338 aa12.83□□□□□ -0.36
FOXN3-212ENST00000556541 LAD1O00515 517 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 TBX3O15119 743 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 EDIL3O43854 480 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
FOXN3-212ENST00000556541 ICAM3P32942 547 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms