RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 ADCY6O43306 1168 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 DUSP11O75319 330 aaKnown RBP19.68■□□□□ 0.74
PSEN1-217ENST00000556533 NAPAP54920 295 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 LRRC41Q15345 812 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 STXBP2Q15833 593 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 IQSEC1Q6DN90 963 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 SAMD3Q8N6K7 520 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 IWS1Q96ST2 819 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 SLC26A6Q9BXS9 759 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 SENP6Q9GZR1 1112 aaPredicted RBP19.68■□□□□ 0.74
PSEN1-217ENST00000556533 PLXNA1Q9UIW2 1896 aa19.68■□□□□ 0.74
PSEN1-217ENST00000556533 RBBP6Q7Z6E9 1792 aaKnown RBP19.67■□□□□ 0.74
PSEN1-217ENST00000556533 DNM1LO00429 736 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 NR3C2P08235 984 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 SMPD1P17405 629 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 PTGS1P23219 599 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 EDNRBP24530 442 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 GHRHRQ02643 423 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 ANKRD1Q15327 319 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 TMEM63BQ5T3F8 832 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 SEPT14Q6ZU15 432 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 RNF180Q86T96 592 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 FERMT2Q96AC1 680 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 IL17RAQ96F46 866 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 HTATIP2Q9BUP3 242 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 ALDH8A1Q9H2A2 487 aaPredicted RBP19.67■□□□□ 0.74
PSEN1-217ENST00000556533 UPF2Q9HAU5 1272 aaKnown RBP19.67■□□□□ 0.74
PSEN1-217ENST00000556533 SPC25Q9HBM1 224 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
PSEN1-217ENST00000556533 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
PSEN1-217ENST00000556533 DYNC1LI2O43237 492 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-217ENST00000556533 PRPF3O43395 683 aaKnown RBP19.66■□□□□ 0.74
PSEN1-217ENST00000556533 C6orf222P0C671 652 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-217ENST00000556533 UBE2SQ16763 222 aa19.66■□□□□ 0.74
PSEN1-217ENST00000556533 ZFP91Q96JP5 570 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-217ENST00000556533 AP5M1Q9H0R1 490 aa19.66■□□□□ 0.74
PSEN1-217ENST00000556533 SLKQ9H2G2 1235 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-217ENST00000556533 SYNRGQ9UMZ2 1314 aa19.66■□□□□ 0.74
PSEN1-217ENST00000556533 BRCA2P51587 3418 aa19.66■□□□□ 0.74
PSEN1-217ENST00000556533 STXBP3O00186 592 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 MEIS2O14770 477 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 EIF3JO75822 258 aaKnown RBP19.65■□□□□ 0.74
PSEN1-217ENST00000556533 SCG2P13521 617 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 IRX5P78411 483 aaPredicted RBP19.65■□□□□ 0.74
PSEN1-217ENST00000556533 SSRP1Q08945 709 aaKnown RBP19.65■□□□□ 0.74
PSEN1-217ENST00000556533 NTRK3Q16288 839 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 PFKFB3Q16875 520 aaPredicted RBP19.65■□□□□ 0.74
PSEN1-217ENST00000556533 CPLX2Q6PUV4 134 aaKnown RBP19.65■□□□□ 0.74
PSEN1-217ENST00000556533 PDCD2LQ9BRP1 358 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 NID2Q14112 1375 aa19.65■□□□□ 0.74
PSEN1-217ENST00000556533 MYADML2A6NDP7 307 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 SMCO2A6NFE2 343 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 ADAMTS4O75173 837 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 TXNP10599 105 aaKnown RBP19.64■□□□□ 0.73
PSEN1-217ENST00000556533 IFNAR1P17181 557 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 ATN1P54259 1190 aaPredicted RBP19.64■□□□□ 0.73
PSEN1-217ENST00000556533 PGM5Q15124 567 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 GNASQ5JWF2 1037 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 TYW1BQ6NUM6 668 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 TLK2Q86UE8 772 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 TRIM22Q8IYM9 498 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 IL31RAQ8NI17 732 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 SCFD2Q8WU76 684 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 BARHL2Q9NY43 387 aa19.64■□□□□ 0.73
PSEN1-217ENST00000556533 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.73
PSEN1-217ENST00000556533 RBM47A0AV96 593 aaKnown RBP19.63■□□□□ 0.73
PSEN1-217ENST00000556533 PIK3CDO00329 1044 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 PFKFB2O60825 505 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 DTNBO60941 627 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 COL6A1P12109 1028 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 CCND2P30279 289 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 ADCY7P51828 1080 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 GJA9P57773 515 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 BEX3Q00994 111 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 KCNA10Q16322 511 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 DUSP28Q4G0W2 176 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 NECAB1Q8N987 351 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 RNF26Q9BY78 433 aaPredicted RBP19.63■□□□□ 0.73
PSEN1-217ENST00000556533 RIC8AQ9NPQ8 531 aa19.63■□□□□ 0.73
PSEN1-217ENST00000556533 GNEQ9Y223 722 aaKnown RBP19.63■□□□□ 0.73
PSEN1-217ENST00000556533 SPDYE3A6NKU9 549 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 EVI5O60447 810 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 SCRN1Q12765 414 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 TTLL4Q14679 1199 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 PKN1Q16512 942 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 PPP1R18Q6NYC8 613 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 VSIG10LQ86VR7 867 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
PSEN1-217ENST00000556533 OR6J1Q8NGC5 347 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 COPS5Q92905 334 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 VTI1AQ96AJ9 217 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 UPF3AQ9H1J1 476 aaKnown RBP19.62■□□□□ 0.73
PSEN1-217ENST00000556533 RTEL1Q9NZ71 1219 aa19.62■□□□□ 0.73
PSEN1-217ENST00000556533 RBM25P49756 843 aaKnown RBP19.61■□□□□ 0.73
PSEN1-217ENST00000556533 ACLYP53396 1101 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 FSCN1Q16658 493 aaKnown RBP19.61■□□□□ 0.73
PSEN1-217ENST00000556533 LY6KQ17RY6 165 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 KLHDC9Q8NEP7 349 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms