RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ABCB11O95342 1321 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 ZBTB43O43298 467 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 CCND3P30281 292 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 GJA8P48165 433 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 GHRHRQ02643 423 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 USH1GQ495M9 461 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 MICU3Q86XE3 530 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 CCDC144CPQ8IYA2 1237 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 CMTR1Q8N1G2 835 aaKnown RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 BRF1Q92994 677 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 MAF1Q9H063 256 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.62
SRP54-210ENST00000556380 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
SRP54-210ENST00000556380 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
SRP54-210ENST00000556380 NID2Q14112 1375 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 SGPL1O95470 568 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 CYBAP13498 195 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 CDC27P30260 824 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 RPS6P62753 249 aaKnown RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 PRAMEF19Q5SWL8 479 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 SYNE3Q6ZMZ3 975 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 DEFB118Q96PH6 123 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 AMNQ9BXJ7 453 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 KATNBL1Q9H079 304 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 NRBP1Q9UHY1 535 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 MRPL11Q9Y3B7 192 aaKnown RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
SRP54-210ENST00000556380 MKI67P46013 3256 aaKnown RBP11.19□□□□□ -0.62
SRP54-210ENST00000556380 DPYSL4O14531 572 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 PDIA3P30101 505 aaKnown RBP11.18□□□□□ -0.62
SRP54-210ENST00000556380 PPP2R5BQ15173 497 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 RTN1Q16799 776 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 RNF207Q6ZRF8 634 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
SRP54-210ENST00000556380 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
SRP54-210ENST00000556380 KIF2CQ99661 725 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
SRP54-210ENST00000556380 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
SRP54-210ENST00000556380 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 CAPN2P17655 700 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 HSD17B4P51659 736 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 FGD1P98174 961 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 TRAF1Q13077 416 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 NTRK3Q16288 839 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 ARMCX2Q7L311 632 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 RRP36Q96EU6 259 aaKnown RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 ZNF274Q96GC6 653 aaPredicted RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
SRP54-210ENST00000556380 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
SRP54-210ENST00000556380 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
SRP54-210ENST00000556380 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 PTPDC1A2A3K4 754 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 SEPT4O43236 478 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 EDNRBP24530 442 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 CALML3P27482 149 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
SRP54-210ENST00000556380 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 SAMD3Q8N6K7 520 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
SRP54-210ENST00000556380 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
SRP54-210ENST00000556380 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
SRP54-210ENST00000556380 PDE4DIPQ5VU43 2346 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 CEP290O15078 2479 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 ASB14A6NK59 587 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 RBM25P49756 843 aaKnown RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 ALDH5A1P51649 535 aaPredicted RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 DNERQ8NFT8 737 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 TAAR1Q96RJ0 339 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms