RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 PCSK9Q8NBP7 692 aaKnown RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 PIBF1Q8WXW3 757 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 IWS1Q96ST2 819 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 AGXT2Q9BYV1 514 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 Q9Y3F1 56 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 TRIOBPQ9H2D6 2365 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
SLIRP-206ENST00000556375 CTAGE5O15320 804 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
SLIRP-206ENST00000556375 RTP1P59025 263 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 KCNA10Q16322 511 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 Q6ZUG5 572 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 CMTR1Q8N1G2 835 aaKnown RBP13.32□□□□□ -0.28
SLIRP-206ENST00000556375 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 BRF1Q92994 677 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
SLIRP-206ENST00000556375 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
SLIRP-206ENST00000556375 ASGR1P07306 291 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 HOXA13P31271 388 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-206ENST00000556375 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-206ENST00000556375 STXBP2Q15833 593 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
SLIRP-206ENST00000556375 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 PDCD2LQ9BRP1 358 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 TM6SF1Q9BZW5 370 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-206ENST00000556375 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
SLIRP-206ENST00000556375 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-206ENST00000556375 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
SLIRP-206ENST00000556375 NR3C2P08235 984 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 PTGS1P23219 599 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.287e-8■□□□□ 9.9
SLIRP-206ENST00000556375 BEX3Q00994 111 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 FUT2Q10981 343 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 TTLL4Q14679 1199 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 CCDC82Q8N4S0 544 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-206ENST00000556375 NAP1L2Q9ULW6 460 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-206ENST00000556375 ELP1O95163 1332 aa13.3□□□□□ -0.28
SLIRP-206ENST00000556375 SCN10AQ9Y5Y9 1956 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 CCDC196A0A1B0GTZ2 297 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 ZEB2O60315 1214 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
SLIRP-206ENST00000556375 TXNP10599 105 aaKnown RBP13.29□□□□□ -0.28
SLIRP-206ENST00000556375 SYN1P17600 705 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 CDC27P30260 824 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 EVCP57679 992 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 PGM5Q15124 567 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 CUL5Q93034 780 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-206ENST00000556375 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
SLIRP-206ENST00000556375 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-206ENST00000556375 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 CABYRO75952 493 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 ARIH2O95376 493 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 CCND2P30279 289 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 CPT1AP50416 773 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 ANAPC15P60006 121 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 WWC2Q6AWC2 1192 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 CCDC62Q6P9F0 684 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 SEPT14Q6ZU15 432 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 VSIG10LQ86VR7 867 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 ZNF713Q8N859 430 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-206ENST00000556375 IL31RAQ8NI17 732 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
SLIRP-206ENST00000556375 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
SLIRP-206ENST00000556375 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 MROH7Q68CQ1 1323 aa13.28□□□□□ -0.28
SLIRP-206ENST00000556375 MEIS2O14770 477 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 MYCLP12524 364 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-206ENST00000556375 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
SLIRP-206ENST00000556375 TLE2Q04725 743 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms