RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OLFML2BQ68BL8 750 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 KRT40Q6A162 431 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 XRRA1Q6P2D8 792 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 FBXO46Q6PJ61 603 aaPredicted RBP8.74□□□□□ -1.01
TDP1-214ENST00000556063 USP17L6PQ6QN14 398 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 SLC30A10Q6XR72 485 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 KRT25Q7Z3Z0 450 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 BLIDQ8IZY5 108 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 DAGLBQ8NCG7 672 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 FBXO18Q8NFZ0 1043 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 TBC1D5Q92609 795 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 AIFM3Q96NN9 605 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 IWS1Q96ST2 819 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
TDP1-214ENST00000556063 GABRQQ9UN88 632 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 CNPY2Q9Y2B0 182 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 PTPN22Q9Y2R2 807 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 CCDC194A0A1B0GVG4 234 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 SOWAHBA6NEL2 793 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 MMP1P03956 469 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 HMGCRP04035 888 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 GRK4P32298 578 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 ALDH5A1P51649 535 aaPredicted RBP8.73□□□□□ -1.01
TDP1-214ENST00000556063 FOSBP53539 338 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 UBXN2AP68543 259 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 CNTN2Q02246 1040 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 PDE4DQ08499 809 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 UBE2SQ16763 222 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 JAKMIP3Q5VZ66 844 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 MAMDC4Q6UXC1 1216 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 MAML3Q96JK9 1138 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 TAAR1Q96RJ0 339 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 TINF2Q9BSI4 451 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 PHF20Q9BVI0 1012 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 NRBP1Q9UHY1 535 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 PCDHA6Q9UN73 950 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 KCNJ14Q9UNX9 436 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 PCDHA8Q9Y5H6 950 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 SYNGAP1Q96PV0 1343 aa8.73□□□□□ -1.01
TDP1-214ENST00000556063 MCM3APO60318 1980 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 DTNBO60941 627 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 STAM2O75886 525 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 NR3C2P08235 984 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 EIF2AK2P19525 551 aaKnown RBP8.72□□□□□ -1.01
TDP1-214ENST00000556063 CCND2P30279 289 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 NONOQ15233 471 aaKnown RBP eCLIP8.72□□□□□ -1.01
TDP1-214ENST00000556063 STXBP2Q15833 593 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 SLC9C1Q4G0N8 1177 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 DIS3L2Q8IYB7 885 aaKnown RBP8.72□□□□□ -1.01
TDP1-214ENST00000556063 NAP1L4Q99733 375 aaKnown RBP8.72□□□□□ -1.01
TDP1-214ENST00000556063 PDCD2LQ9BRP1 358 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 FOXP1Q9H334 677 aaPredicted RBP8.72□□□□□ -1.01
TDP1-214ENST00000556063 ABHD16BQ9H3Z7 469 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 PXMP2Q9NR77 195 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.72□□□□□ -1.01
TDP1-214ENST00000556063 COL20A1Q9P218 1284 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 PTCH2Q9Y6C5 1203 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 ZSWIM8A7E2V4 1837 aa8.72□□□□□ -1.01
TDP1-214ENST00000556063 KIAA0100Q14667 2235 aaKnown RBP8.71□□□□□ -1.02
TDP1-214ENST00000556063 EIF3JO75822 258 aaKnown RBP8.71□□□□□ -1.02
TDP1-214ENST00000556063 MYCLP12524 364 aaPredicted RBP8.71□□□□□ -1.02
TDP1-214ENST00000556063 ELNP15502 786 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 ZNF76P36508 570 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 SREBF1P36956 1147 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 CLK2P49760 499 aaKnown RBP8.71□□□□□ -1.02
TDP1-214ENST00000556063 CAP1Q01518 475 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 GUCY1B3Q02153 619 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 PGM5Q15124 567 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 CCL14Q16627 93 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 PCNX4Q63HM2 1172 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 MORC4Q8TE76 937 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 TRIB2Q92519 343 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 VTA1Q9NP79 307 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 GJB4Q9NTQ9 266 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 NOL7Q9UMY1 257 aaKnown RBP8.71□□□□□ -1.02
TDP1-214ENST00000556063 RPTORQ8N122 1335 aa8.71□□□□□ -1.02
TDP1-214ENST00000556063 VPS37CA5D8V6 355 aaPredicted RBP8.7□□□□□ -1.02
TDP1-214ENST00000556063 BTBD18B2RXH4 712 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 MSCO60682 206 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 INHAP05111 366 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 SYT1P21579 422 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 EDNRBP24530 442 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 CYP2C19P33261 490 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 USP11P51784 963 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 KCNV1Q6PIU1 500 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 PIK3AP1Q6ZUJ8 805 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 NLRX1Q86UT6 975 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
TDP1-214ENST00000556063 SCFD2Q8WU76 684 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms