RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TGFB3P10600 412 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 FOSL2P15408 326 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 CASTP20810 708 aaKnown RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 CYP2C18P33260 490 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 SEC23AQ15436 765 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 CDC37Q16543 378 aaPredicted RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 IFIT1BQ5T764 474 aaKnown RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 SLC30A10Q6XR72 485 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 SESTD1Q86VW0 696 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 FBXO11Q86XK2 927 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 PHOSPHO2Q8TCD6 241 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 EMID1Q96A84 441 aaPredicted RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 AMNQ9BXJ7 453 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 JMJD4Q9H9V9 463 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 MSRAQ9UJ68 235 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 TNKSO95271 1327 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 ZBTB5O15062 677 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 GH1P01241 217 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 BFSP2Q13515 415 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 GRIN2CQ14957 1233 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 QRICH1Q2TAL8 776 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 USH1GQ495M9 461 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 TMEM63BQ5T3F8 832 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 TTC22Q5TAA0 569 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 STOX1Q6ZVD7 989 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 MAFAQ8NHW3 353 aaPredicted RBP9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 MYLIPQ8WY64 445 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 TBC1D5Q92609 795 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 TAAR1Q96RJ0 339 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 RMDN3Q96TC7 470 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 MAP3K14Q99558 947 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 TRPV6Q9H1D0 765 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 RIOX1Q9H6W3 641 aa9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 DDX41Q9UJV9 622 aaKnown RBP9.07□□□□□ -0.96
PTCSC3-201ENST00000556013 ERICH2A1L162 156 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 KLRF2D3W0D1 207 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 PPFIA4O75335 1185 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 NR3C2P08235 984 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 MYL3P08590 195 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 ACRP10323 421 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 ACTN1P12814 892 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 CHMLP26374 656 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 HSD17B4P51659 736 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 PSMC6P62333 389 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 SART3Q15020 963 aaKnown RBP9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 ARHGEF16Q5VV41 709 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 TMTC2Q8N394 836 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 NCOA7Q8NI08 942 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 CAGE1Q8TC20 777 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 WNT8AQ9H1J5 351 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 SLC28A3Q9HAS3 691 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 VAT1LQ9HCJ6 419 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 MAD2L2Q9UI95 211 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 PCDHA11Q9Y5I1 949 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 SLC4A7Q9Y6M7 1214 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 DDX49Q9Y6V7 483 aaKnown RBP9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 MYO9BQ13459 2157 aa9.06□□□□□ -0.96
PTCSC3-201ENST00000556013 CDH23Q9H251 3354 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 DHX16O60231 1041 aaKnown RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 STAM2O75886 525 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 ARIH2O95376 493 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 CYP21A2P08686 494 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 IQCF3P0C7M6 154 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 HOXD8P13378 290 aaPredicted RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 POU3F3P20264 500 aaPredicted RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 PDE4AP27815 886 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 CCL23P55773 120 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 ARHGAP1Q07960 439 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 RBL2Q08999 1139 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 TROAPQ12815 778 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 DGKDQ16760 1214 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 OTOP2Q7RTS6 562 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 VSIG10LQ86VR7 867 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 VWCEQ96DN2 955 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 PXMP2Q9NR77 195 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 TRMT13Q9NUP7 481 aaKnown RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 CXXC1Q9P0U4 656 aaPredicted RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 PCDHA1Q9Y5I3 950 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 UMODL1Q5DID0 1318 aa9.05□□□□□ -0.96
PTCSC3-201ENST00000556013 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 PNMA6FA0A0J9YX94 578 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 GRXCR1A8MXD5 290 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 IFIT3O14879 490 aaKnown RBP9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 SGSM2O43147 1006 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms