RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
LRP1-209ENST00000555941 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
LRP1-209ENST00000555941 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
LRP1-209ENST00000555941 UBAC1Q9BSL1 405 aa13.44□□□□□ -0.26
LRP1-209ENST00000555941 PBX4Q9BYU1 374 aa13.44□□□□□ -0.26
LRP1-209ENST00000555941 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
LRP1-209ENST00000555941 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 TNKSO95271 1327 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 RFC2P35250 354 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 CCL23P55773 120 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 TRAF1Q13077 416 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 FBXO11Q86XK2 927 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 SYTL5Q8TDW5 730 aaPredicted RBP13.43□□□□□ -0.26
LRP1-209ENST00000555941 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
LRP1-209ENST00000555941 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
LRP1-209ENST00000555941 MYH6P13533 1939 aa13.43□□□□□ -0.26
LRP1-209ENST00000555941 UMODL1Q5DID0 1318 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 STXBP2Q15833 593 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
LRP1-209ENST00000555941 CCDC62Q6P9F0 684 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 GAS2L1Q99501 681 aaPredicted RBP13.42□□□□□ -0.26
LRP1-209ENST00000555941 CPVLQ9H3G5 476 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
LRP1-209ENST00000555941 CXXC1Q9P0U4 656 aaPredicted RBP13.42□□□□□ -0.26
LRP1-209ENST00000555941 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 CHD9Q3L8U1 2897 aa13.42□□□□□ -0.26
LRP1-209ENST00000555941 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
LRP1-209ENST00000555941 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
LRP1-209ENST00000555941 PBX2P40425 430 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 GHRHRQ02643 423 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 TRDNQ13061 729 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 OTOP2Q7RTS6 562 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 SYMPKQ92797 1274 aaKnown RBP13.41□□□□□ -0.26
LRP1-209ENST00000555941 RMDN3Q96TC7 470 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 SLC28A3Q9HAS3 691 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 KIAA1217Q5T5P2 1943 aa13.41□□□□□ -0.26
LRP1-209ENST00000555941 PRUNE2Q8WUY3 3088 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 GH1P01241 217 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 CYP2C9P11712 490 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 ACTN1P12814 892 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 BFSP2Q13515 415 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 SEC23AQ15436 765 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 SESTD1Q86VW0 696 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 RETREG2Q8NC44 543 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
LRP1-209ENST00000555941 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
LRP1-209ENST00000555941 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
LRP1-209ENST00000555941 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 ARIH2O95376 493 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 CASTP20810 708 aaKnown RBP13.39□□□□□ -0.27
LRP1-209ENST00000555941 HSD17B4P51659 736 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 CCDC155Q8N6L0 562 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 COPS5Q92905 334 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 SCLYQ96I15 445 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 COL20A1Q9P218 1284 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
LRP1-209ENST00000555941 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
LRP1-209ENST00000555941 ZBTB5O15062 677 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 PARNO95453 639 aaKnown RBP13.38□□□□□ -0.27
LRP1-209ENST00000555941 CFBP00751 764 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 NR3C2P08235 984 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 MMP3P08254 477 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
LRP1-209ENST00000555941 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 DGKDQ16760 1214 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 CAGE1Q8TC20 777 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 AFG1LQ8WV93 481 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 PRDM12Q9H4Q4 367 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 PXMP2Q9NR77 195 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
LRP1-209ENST00000555941 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 GBF1Q92538 1859 aa13.38□□□□□ -0.27
LRP1-209ENST00000555941 ERICH2A1L162 156 aa13.37□□□□□ -0.27
LRP1-209ENST00000555941 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms