RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 LINC00116Q8NCU8 138 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 PCDH19Q8TAB3 1148 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 PANK1Q8TE04 598 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 MMP19Q99542 508 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 FAM83CQ9BQN1 747 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 CLEC1BQ9P126 229 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 B4GALT6Q9UBX8 382 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 COQ6Q9Y2Z9 468 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 RIPOR2Q9Y4F9 1068 aa3.98□□□□□ -1.77
MTHFD1-212ENST00000555858 CNTNAP5Q8WYK1 1306 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 NPHP3-ACAD11A0A0J9YXS1 232 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 FAM155AB1AL88 458 aaPredicted RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 WDR64B1ANS9 1081 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 MYO1BO43795 1136 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 SOD2P04179 222 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 GSTM1P09488 218 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 SRGAP2CP0DJJ0 459 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 LCP1P13796 627 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 ATF3P18847 181 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 ENDOUP21128 410 aaKnown RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 MECP2P51608 486 aaKnown RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 PCBP3P57721 371 aaKnown RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 CYP27A1Q02318 531 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 HLTFQ14527 1009 aaKnown RBP eCLIP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 RGL3Q3MIN7 710 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 RTP2Q5QGT7 225 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 NXNQ6DKJ4 435 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 ZAR1Q86SH2 424 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 RCBTB1Q8NDN9 531 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 GATA6Q92908 595 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 FBXW5Q969U6 566 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 TBC1D32Q96NH3 1257 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 GPR101Q96P66 508 aaPredicted RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 RTFDC1Q9BY42 306 aaPredicted RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 DUSP15Q9H1R2 295 aaPredicted RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 MYH16Q9H6N6 1097 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 EMC7Q9NPA0 242 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 THG1LQ9NWX6 298 aaKnown RBP3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 ZNF180Q9UJW8 692 aa3.97□□□□□ -1.77
MTHFD1-212ENST00000555858 TNKSO95271 1327 aa3.96□□□□□ -1.77
MTHFD1-212ENST00000555858 SSU72P8A0A1W2PR75 194 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 PTPDC1A2A3K4 754 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 CCDC66A2RUB6 948 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GOLGA6CA6NDK9 693 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GOLGA6BA6NDN3 693 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 FAM47E-STBD1D6RA91 191 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 FGF10O15520 208 aaPredicted RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 PLIN1O60240 522 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 RFPL1O75677 317 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 ABLIM3O94929 683 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 KRT18P05783 430 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 SYPP08247 313 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GOLGA6DP0CG33 693 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 ATP2A2P16615 1042 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GRK2P25098 689 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 COL8A1P27658 744 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GRK3P35626 688 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 DNM2P50570 870 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 KPNA1P52294 538 aaPredicted RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 ST5P78524 1137 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 ARHGAP44Q17R89 818 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GORABQ5T7V8 394 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 FAM102BQ5T8I3 360 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 C16orf59Q7L2K0 433 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 OVCH1Q7RTY7 1134 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 C14orf80Q86SX3 495 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 ALYREFQ86V81 257 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 TSPYL5Q86VY4 417 aaPredicted RBP3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 TCEAL8Q8IYN2 117 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 USHBP1Q8N6Y0 703 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 TTC8Q8TAM2 541 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 MORC4Q8TE76 937 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 CHTF18Q8WVB6 975 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 SCYL1Q96KG9 808 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 PTCHD1Q96NR3 888 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 IPPKQ9H8X2 491 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 SPTLC3Q9NUV7 552 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 GOLGA6AQ9NYA3 693 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 TCFL5Q9UL49 500 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 PCDHA2Q9Y5H9 948 aa3.96□□□□□ -1.78
MTHFD1-212ENST00000555858 LOC102724159A0A0B4J2E5 919 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 ZSCAN20P17040 1043 aaPredicted RBP3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 TPP2P29144 1249 aaPredicted RBP3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 ADMP35318 185 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 GTF2A2P52657 109 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 SESN3P58005 492 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 RHBDL3P58872 404 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 ERVK-21P61565 698 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 RBM10P98175 930 aaKnown RBP3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 LSAMPQ13449 338 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 MLC1Q15049 377 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 PWP2Q15269 919 aaKnown RBP3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 CRY1Q16526 586 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 PTPN21Q16825 1174 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 INF2Q27J81 1249 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 ABCB5Q2M3G0 1257 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 MAP9Q49MG5 647 aa3.95□□□□□ -1.78
MTHFD1-212ENST00000555858 TREML4Q6UXN2 200 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms