RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 NFXL1Q6ZNB6 911 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 PIGSQ96S52 555 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 COL20A1Q9P218 1284 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 SLC27A2O14975 620 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 PRC1O43663 620 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 TROAPQ12815 778 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 SEPT14Q6ZU15 432 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 Q7L0L9 218 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 IGDCC4Q8TDY8 1250 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 MTMR8Q96EF0 704 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 IWS1Q96ST2 819 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 PPP1R12CQ9BZL4 782 aa28.38■■■□□ 2.13
PRKCH-216ENST00000555542 PPP1R11O60927 126 aaPredicted RBP28.37■■■□□ 2.13
PRKCH-216ENST00000555542 EIF2AK2P19525 551 aaKnown RBP28.37■■■□□ 2.13
PRKCH-216ENST00000555542 MCM5P33992 734 aa28.37■■■□□ 2.13
PRKCH-216ENST00000555542 STXBP2Q15833 593 aa28.37■■■□□ 2.13
PRKCH-216ENST00000555542 CTCFLQ8NI51 663 aaPredicted RBP28.37■■■□□ 2.13
PRKCH-216ENST00000555542 RNPC3Q96LT9 517 aaKnown RBP28.37■■■□□ 2.13
PRKCH-216ENST00000555542 SEZ6LQ9BYH1 1024 aa28.37■■■□□ 2.13
PRKCH-216ENST00000555542 RIOX1Q9H6W3 641 aa28.37■■■□□ 2.13
PRKCH-216ENST00000555542 CREB3L3Q68CJ9 461 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 ZNF654Q8IZM8 581 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 PIBF1Q8WXW3 757 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 COPS5Q92905 334 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 CCDC136Q96JN2 1154 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 LY9Q9HBG7 655 aa28.36■■■□□ 2.13
PRKCH-216ENST00000555542 CCDC69A6NI79 296 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 DDAH1O94760 285 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 KIF5BP33176 963 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 MFSD5Q6N075 450 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 TMEM199Q8N511 208 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 SLC43A3Q8NBI5 491 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 MYL10Q9BUA6 226 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 PXMP2Q9NR77 195 aa28.35■■■□□ 2.13
PRKCH-216ENST00000555542 PNMA6FA0A0J9YX94 578 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 CD4P01730 458 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 HSD17B4P51659 736 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 EPHB4P54760 987 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 PURAQ00577 322 aaKnown RBP28.34■■■□□ 2.13
PRKCH-216ENST00000555542 RNF20Q5VTR2 975 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 TMEM87BQ96K49 555 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 MTG1Q9BT17 334 aaPredicted RBP28.34■■■□□ 2.13
PRKCH-216ENST00000555542 MTA3Q9BTC8 594 aa28.34■■■□□ 2.13
PRKCH-216ENST00000555542 MAP3K20Q9NYL2 800 aaKnown RBP28.34■■■□□ 2.13
PRKCH-216ENST00000555542 BAZ2BQ9UIF8 2168 aaKnown RBP28.34■■■□□ 2.13
PRKCH-216ENST00000555542 KIAA1217Q5T5P2 1943 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 OPLAHO14841 1288 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 CYTH3O43739 400 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 ARIH2O95376 493 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 HOXA13P31271 388 aaPredicted RBP28.33■■■□□ 2.13
PRKCH-216ENST00000555542 PPIGQ13427 754 aaKnown RBP eCLIP28.33■■■□□ 2.13
PRKCH-216ENST00000555542 SLC35G1Q2M3R5 365 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 TMTC2Q8N394 836 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 GRIN2DO15399 1336 aa28.33■■■□□ 2.13
PRKCH-216ENST00000555542 KPNA6O60684 536 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 CDC45O75419 566 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 NR3C2P08235 984 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 MYCLP12524 364 aaPredicted RBP28.32■■■□□ 2.12
PRKCH-216ENST00000555542 NECTIN1Q15223 517 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 FAM47CQ5HY64 1035 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 TRPV6Q9H1D0 765 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 HIPK3Q9H422 1215 aa28.32■■■□□ 2.12
PRKCH-216ENST00000555542 GCOM1H8Y6P7 765 aaPredicted RBP28.31■■■□□ 2.12
PRKCH-216ENST00000555542 SH2B2O14492 632 aaPredicted RBP28.31■■■□□ 2.12
PRKCH-216ENST00000555542 B4GALT4O60513 344 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 EIF3JO75822 258 aaKnown RBP28.31■■■□□ 2.12
PRKCH-216ENST00000555542 GH1P01241 217 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 POLR2MP0CAP2 368 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 CHMP4BP1P59074 171 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 LY6KQ17RY6 165 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 SAMD3Q8N6K7 520 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 RRP36Q96EU6 259 aaKnown RBP28.31■■■□□ 2.12
PRKCH-216ENST00000555542 MAP3K14Q99558 947 aa28.31■■■□□ 2.12
PRKCH-216ENST00000555542 SEC63Q9UGP8 760 aaKnown RBP28.31■■■□□ 2.12
PRKCH-216ENST00000555542 CSF2RAP15509 400 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 CYP2C18P33260 490 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 GHRHRQ02643 423 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 ZNF697Q5TEC3 545 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 FCHSD1Q86WN1 690 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 ALDH8A1Q9H2A2 487 aaPredicted RBP28.3■■■□□ 2.12
PRKCH-216ENST00000555542 MRVI1Q9Y6F6 885 aa28.3■■■□□ 2.12
PRKCH-216ENST00000555542 A6NJR5 290 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 GNAQP50148 359 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 CCDC62Q6P9F0 684 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 FAM161BQ96MY7 647 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 LZTS2Q9BRK4 669 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 LRRC2Q9BYS8 371 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 SLC12A7Q9Y666 1083 aa28.29■■■□□ 2.12
PRKCH-216ENST00000555542 CALM1P0DP23 149 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 CALM2P0DP24 149 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 CALM3P0DP25 149 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 RXRAP19793 462 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 AFG1LQ8WV93 481 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 PDCD2LQ9BRP1 358 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 SPZ1Q9BXG8 430 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 MTMR10Q9NXD2 777 aa28.28■■■□□ 2.12
PRKCH-216ENST00000555542 SUPT20HL2P0C7V6 817 aa28.27■■■□□ 2.12
PRKCH-216ENST00000555542 LIFRP42702 1097 aa28.27■■■□□ 2.12
PRKCH-216ENST00000555542 SMAD3P84022 425 aaKnown RBP28.27■■■□□ 2.12
PRKCH-216ENST00000555542 NBPF20Q3BBV1 942 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms