RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 HAUS3Q68CZ6 603 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 BLZF1Q9H2G9 400 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
IFT43-209ENST00000555305 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 PPP1R3GB7ZBB8 358 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 EDIL3O43854 480 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 PAK1Q13153 545 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 HYIQ5T013 277 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 ERMNQ8TAM6 284 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 SNX29Q8TEQ0 813 aa16.31■□□□□ 0.2
IFT43-209ENST00000555305 PITPNM2Q9BZ72 1349 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 PVALEFA0A1B0GWK0 134 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 ICAM1P05362 532 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
IFT43-209ENST00000555305 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
IFT43-209ENST00000555305 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 KIAA1524Q8TCG1 905 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
IFT43-209ENST00000555305 HAS1Q92839 578 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
IFT43-209ENST00000555305 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
IFT43-209ENST00000555305 PSMA7O14818 248 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 KIAA1755Q5JYT7 1200 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 LRRC8AQ8IWT6 810 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 GIMAP8Q8ND71 665 aaPredicted RBP16.29■□□□□ 0.2
IFT43-209ENST00000555305 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
IFT43-209ENST00000555305 STAMQ92783 540 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
IFT43-209ENST00000555305 EGFRP00533 1210 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 ATP1A3P13637 1013 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 KMT5BQ4FZB7 885 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 FILIP1LQ4L180 1135 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 DHTKD1Q96HY7 919 aaPredicted RBP16.28■□□□□ 0.2
IFT43-209ENST00000555305 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
IFT43-209ENST00000555305 SPTLC3Q9NUV7 552 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 OFD1O75665 1012 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 ZNF76P36508 570 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 PRELPP51888 382 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 PSMD2Q13200 908 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 GRB10Q13322 594 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
IFT43-209ENST00000555305 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
IFT43-209ENST00000555305 CDKAL1Q5VV42 579 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 FILIP1Q7Z7B0 1213 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 ADSSL1Q8N142 457 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 RAD54LQ92698 747 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
IFT43-209ENST00000555305 MAF1Q9H063 256 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 NRBP1Q9UHY1 535 aa16.28■□□□□ 0.2
IFT43-209ENST00000555305 POTEMA6NI47 508 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 C19orf81C9J6K1 198 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 OPLAHO14841 1288 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
IFT43-209ENST00000555305 CASP1P29466 404 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 SNAP25P60880 206 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 ASIC1P78348 528 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.2
IFT43-209ENST00000555305 PRR16Q569H4 304 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 ANGEL2Q5VTE6 544 aaKnown RBP16.27■□□□□ 0.2
IFT43-209ENST00000555305 KLHL10Q6JEL2 608 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
IFT43-209ENST00000555305 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.2
IFT43-209ENST00000555305 KLRC4O43908 158 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CFBP00751 764 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
IFT43-209ENST00000555305 GHRHRQ02643 423 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 A0A1B0GTH6 734 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
IFT43-209ENST00000555305 KCNJ6P48051 423 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 NBPF12Q5TAG4 269 aaPredicted RBP16.26■□□□□ 0.19
IFT43-209ENST00000555305 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
IFT43-209ENST00000555305 CACTINQ8WUQ7 758 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms