RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TMEM240Q5SV17 173 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 TMED8Q6PL24 325 aaPredicted RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 ZBTB21Q9ULJ3 1066 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 FAM237AA0A1B0GTK4 181 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 PPP6R2O75170 966 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 GDF11O95390 407 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 TIMP1P01033 207 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CMA1P23946 247 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 ADORA2AP29274 412 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 RCAN1P53805 252 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
SRP54-205ENST00000554803 DMTNQ08495 405 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 FAAP100Q0VG06 881 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 STK38Q15208 465 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
SRP54-205ENST00000554803 RAB30Q15771 203 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CT47A1Q5JQC4 288 aaPredicted RBP12.65□□□□□ -0.38
SRP54-205ENST00000554803 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 FAM173BQ6P4H8 233 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CCDC174Q6PII3 467 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 C16orf59Q7L2K0 433 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
SRP54-205ENST00000554803 DPP9Q86TI2 863 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 FBXO18Q8NFZ0 1043 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 KIF18AQ8NI77 898 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 DNAJC18Q9H819 358 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 TAF6LQ9Y6J9 622 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
SRP54-205ENST00000554803 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
SRP54-205ENST00000554803 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
SRP54-205ENST00000554803 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 CPLX1O14810 134 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 TRDNQ13061 729 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.397e-9■□□□□ 8.7
SRP54-205ENST00000554803 MFSD5Q6N075 450 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 CATSPERGQ6ZRH7 1159 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 METTL16Q86W50 562 aaKnown RBP12.64□□□□□ -0.39
SRP54-205ENST00000554803 TEX11Q8IYF3 940 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 CACTINQ8WUQ7 758 aaKnown RBP12.64□□□□□ -0.39
SRP54-205ENST00000554803 HERVK_113Q902F9 699 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 WASF1Q92558 559 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 SRRTQ9BXP5 876 aaKnown RBP12.64□□□□□ -0.39
SRP54-205ENST00000554803 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
SRP54-205ENST00000554803 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
SRP54-205ENST00000554803 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 ZNF318Q5VUA4 2279 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 GOLGA6L9A6NEM1 432 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
SRP54-205ENST00000554803 SPTLC2O15270 562 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 STRNO43815 780 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 FGAP02671 866 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 APPP05067 770 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 SKILP12757 684 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 NLRP12P59046 1061 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 PPP4CP60510 307 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 EVX2Q03828 476 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 RNF180Q86T96 592 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
SRP54-205ENST00000554803 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■□□□□ 9.6
SRP54-205ENST00000554803 DDX11Q96FC9 970 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 NKX2-4Q9H2Z4 354 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 SLC28A3Q9HAS3 691 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 NID2Q14112 1375 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms