RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GNEQ9Y223 722 aaKnown RBP8.75□□□□□ -1.01
LINC00640-201ENST00000554409 Q9Y3F1 56 aa8.75□□□□□ -1.01
LINC00640-201ENST00000554409 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 A0A1W2PQ45 241 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 A0A1W2PQY0 241 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 MYADML2A6NDP7 307 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 B4DLN1 442 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 OPLAHO14841 1288 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CTAGE5O15320 804 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 EPB41L2O43491 1005 aaKnown RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CYTH3O43739 400 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 PPP1R11O60927 126 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CENPBP07199 599 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CALM1P0DP23 149 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CALM2P0DP24 149 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CALM3P0DP25 149 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 SMPD1P17405 629 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 KIF5BP33176 963 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 BMP8BP34820 402 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 HSD17B4P51659 736 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 MRPL12P52815 198 aaKnown RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 ACLYP53396 1101 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 TNFAIP2Q03169 654 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 KRT32Q14532 448 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 FBXO16Q8IX29 292 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 PCSK9Q8NBP7 692 aaKnown RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CTCFLQ8NI51 663 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 NUP133Q8WUM0 1156 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 KCNB2Q92953 911 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 NEK1Q96PY6 1258 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 GDF15Q99988 308 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 SPZ1Q9BXG8 430 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 VAT1LQ9HCJ6 419 aa8.74□□□□□ -1.01
LINC00640-201ENST00000554409 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
LINC00640-201ENST00000554409 CCDC69A6NI79 296 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 SLC34A2O95436 690 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 C6orf222P0C671 652 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-201ENST00000554409 SYN1P17600 705 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 GNAQP50148 359 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 EXOSC10Q01780 885 aaKnown RBP8.73□□□□□ -1.01
LINC00640-201ENST00000554409 PDE4DQ08499 809 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 KCNA10Q16322 511 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 TRIM60Q495X7 471 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 DUSP28Q4G0W2 176 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 EEPD1Q7L9B9 569 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 TLK2Q86UE8 772 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 SGMS1Q86VZ5 419 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 SYTL5Q8TDW5 730 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-201ENST00000554409 TBC1D5Q92609 795 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 FERMT2Q96AC1 680 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 PIGSQ96S52 555 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 LZTS2Q9BRK4 669 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 PDGFCQ9NRA1 345 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 COL20A1Q9P218 1284 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 ZMYND8Q9ULU4 1186 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-201ENST00000554409 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 PCDHA1Q9Y5I3 950 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 DDX49Q9Y6V7 483 aaKnown RBP8.73□□□□□ -1.01
LINC00640-201ENST00000554409 ELP1O95163 1332 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 CEP290O15078 2479 aa8.73□□□□□ -1.01
LINC00640-201ENST00000554409 BAZ2BQ9UIF8 2168 aaKnown RBP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 POTEMA6NI47 508 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 NKRFO15226 690 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 REC8O95072 547 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 CFBP00751 764 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 ASGR1P07306 291 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 HSPA4P34932 840 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 ADCK5Q3MIX3 580 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 ANKRD33Q7Z3H0 272 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 HOMER1Q86YM7 354 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 NSUN6Q8TEA1 469 aaKnown RBP8.72□□□□□ -1.01
LINC00640-201ENST00000554409 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 TOX2Q96NM4 488 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 TAAR1Q96RJ0 339 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 MYL10Q9BUA6 226 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 SEZ6LQ9BYH1 1024 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 WDR11Q9BZH6 1224 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 AP5M1Q9H0R1 490 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 STARD7Q9NQZ5 370 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 PDLIM7Q9NR12 457 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 PXMP2Q9NR77 195 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 MROH7Q68CQ1 1323 aa8.72□□□□□ -1.01
LINC00640-201ENST00000554409 A0A0U1RQG5 324 aaPredicted RBP8.71□□□□□ -1.02
LINC00640-201ENST00000554409 DYNC1LI2O43237 492 aaPredicted RBP8.71□□□□□ -1.02
LINC00640-201ENST00000554409 ZEB2O60315 1214 aa8.71□□□□□ -1.02
LINC00640-201ENST00000554409 CABYRO75952 493 aa8.71□□□□□ -1.02
LINC00640-201ENST00000554409 CDK7P50613 346 aa8.71□□□□□ -1.02
LINC00640-201ENST00000554409 FXR1P51114 621 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00640-201ENST00000554409 RCAN1P53805 252 aa8.71□□□□□ -1.02
LINC00640-201ENST00000554409 BEX3Q00994 111 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms