RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 HOMER2Q9NSB8 354 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 BTBD7Q9P203 1132 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 RBPJLQ9UBG7 517 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 MORF4L1Q9UBU8 362 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 ABT1Q9ULW3 272 aaKnown RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 RIPK3Q9Y572 518 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 TCHHQ07283 1943 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 FAM237AA0A1B0GTK4 181 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 RASSF10A6NK89 507 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 TBX3O15119 743 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 GADD45BO75293 160 aaPredicted RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 TDP2O95551 362 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 CYP2C8P10632 490 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 CMA1P23946 247 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 MARCKSP29966 332 aaPredicted RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 LONP1P36776 959 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 ERVK-24P63145 666 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 SETQ01105 290 aaPredicted RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 FAM110CQ1W6H9 321 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 Q4G0T1 1027 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 NSMFQ6X4W1 530 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 FAM43AQ8N2R8 423 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 C4orf32Q8N8J7 132 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 DNERQ8NFT8 737 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 GPT2Q8TD30 523 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 MRPS27Q92552 414 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 TBC1D5Q92609 795 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 PTPN18Q99952 460 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 PAGR1Q9BTK6 254 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 MOV10L1Q9BXT6 1211 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 MROH8Q9H579 483 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 TXNRD2Q9NNW7 524 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 CREBZFQ9NS37 354 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 CYP39A1Q9NYL5 469 aa8.68□□□□□ -1.02
TDP1-209ENST00000554180 DDX25Q9UHL0 483 aaKnown RBP8.68□□□□□ -1.02
TDP1-209ENST00000554180 LOC102724159A0A0B4J2E5 919 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 IGF2BP3O00425 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
TDP1-209ENST00000554180 EDIL3O43854 480 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 BCRP11274 1271 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 ERCC3P19447 782 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 APLP1P51693 650 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 FAM160A1Q05DH4 1040 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 NOGQ13253 232 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 BAATQ14032 418 aaPredicted RBP8.67□□□□□ -1.02
TDP1-209ENST00000554180 PWP2Q15269 919 aaKnown RBP8.67□□□□□ -1.02
TDP1-209ENST00000554180 CALCRLQ16602 461 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 PCNX4Q63HM2 1172 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 SLC30A10Q6XR72 485 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 DTHD1Q6ZMT9 781 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 NIPA1Q7RTP0 329 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 SLFN12Q8IYM2 578 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 FSIP1Q8NA03 581 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 GPRC5AQ8NFJ5 357 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 NSUN6Q8TEA1 469 aaKnown RBP8.67□□□□□ -1.02
TDP1-209ENST00000554180 AK8Q96MA6 479 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 MTMR9Q96QG7 549 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 RMDN3Q96TC7 470 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 PYM1Q9BRP8 204 aaKnown RBP8.67□□□□□ -1.02
TDP1-209ENST00000554180 RAB34Q9BZG1 259 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 TMEM60Q9H2L4 133 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 KCNMB3Q9NPA1 279 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 DDX19AQ9NUU7 478 aaKnown RBP8.67□□□□□ -1.02
TDP1-209ENST00000554180 COL20A1Q9P218 1284 aa8.67□□□□□ -1.02
TDP1-209ENST00000554180 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
TDP1-209ENST00000554180 ADGRA2Q96PE1 1338 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 IGLV3-22A0A075B6J6 115 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 VWA3AA6NCI4 1184 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 STRNO43815 780 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 SLC37A4O43826 429 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 STAM2O75886 525 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 ALDH1A1P00352 501 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 ZNF76P36508 570 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 TM4SF4P48230 202 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.02
TDP1-209ENST00000554180 KCTD2Q14681 263 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 PGM5Q15124 567 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 TAF1CQ15572 869 aaPredicted RBP8.66□□□□□ -1.02
TDP1-209ENST00000554180 TMEM266Q2M3C6 531 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 CEP55Q53EZ4 464 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 IFNL1Q8IU54 200 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 CCAR1Q8IX12 1150 aaKnown RBP8.66□□□□□ -1.02
TDP1-209ENST00000554180 ABRAQ8N0Z2 381 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 ANKRD35Q8N283 1001 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 IGSF22Q8N9C0 903 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 LENG9Q96B70 501 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 FAM20AQ96MK3 541 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms