RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 SLC43A3Q8NBI5 491 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 ZKSCAN3Q9BRR0 538 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-210ENST00000553779 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 SALL3Q9BXA9 1300 aa11.6□□□□□ -0.55
ACTN1-210ENST00000553779 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 PTPRSQ13332 1948 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 KPNA6O60684 536 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 RABGGTBP53611 331 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 RPS6P62753 249 aaKnown RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 PURAQ00577 322 aaKnown RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 HDAC1Q13547 482 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 TICAM2Q86XR7 235 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 TBC1D10CQ8IV04 446 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 TTC14Q96N46 770 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 RWDD1Q9H446 243 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 REV3LO60673 3130 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 NEDD4P46934 1319 aa11.59□□□□□ -0.55
ACTN1-210ENST00000553779 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-210ENST00000553779 HIP1O00291 1037 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-210ENST00000553779 KCNJ6P48051 423 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 BFSP2Q13515 415 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 NBPF20Q3BBV1 942 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 TMEM63BQ5T3F8 832 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.56
ACTN1-210ENST00000553779 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 PCDHA11Q9Y5I1 949 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 GRIN2DO15399 1336 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 ABCB11O95342 1321 aa11.58□□□□□ -0.56
ACTN1-210ENST00000553779 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 KIF28PB7ZC32 967 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 KDM4AO75164 1064 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 FGRP09769 529 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 SDSP20132 328 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 RFC2P35250 354 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
ACTN1-210ENST00000553779 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
ACTN1-210ENST00000553779 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 TMEM67Q5HYA8 995 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 NFRKBQ6P4R8 1299 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 PPP1R13LQ8WUF5 828 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 COPS5Q92905 334 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 PRDM6Q9NQX0 595 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 YBX2Q9Y2T7 364 aaKnown RBP11.57□□□□□ -0.56
ACTN1-210ENST00000553779 SIP14410 1827 aa11.57□□□□□ -0.56
ACTN1-210ENST00000553779 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
ACTN1-210ENST00000553779 GH1P01241 217 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
ACTN1-210ENST00000553779 NOVP48745 357 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 NT5C2P49902 561 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 PTGISQ16647 500 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 ARHGEF16Q5VV41 709 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 NSUN6Q8TEA1 469 aaKnown RBP11.56□□□□□ -0.56
ACTN1-210ENST00000553779 ATXN2LQ8WWM7 1075 aaKnown RBP11.56□□□□□ -0.56
ACTN1-210ENST00000553779 SLC9A7Q96T83 725 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 KRT23Q9C075 422 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 CPVLQ9H3G5 476 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 CNNM2Q9H8M5 875 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
ACTN1-210ENST00000553779 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
ACTN1-210ENST00000553779 NLRC5Q86WI3 1866 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
ACTN1-210ENST00000553779 B4E1Z4 1266 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 CA3P07451 260 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 MYOGP15173 224 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 EIF2AK2P19525 551 aaKnown RBP11.55□□□□□ -0.56
ACTN1-210ENST00000553779 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-210ENST00000553779 AAMPQ13685 434 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 STXBP2Q15833 593 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 IFIT1BQ5T764 474 aaKnown RBP11.55□□□□□ -0.56
ACTN1-210ENST00000553779 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 ADAMTS19Q8TE59 1207 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-210ENST00000553779 RMDN3Q96TC7 470 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
ACTN1-210ENST00000553779 A6NJR5 290 aa11.54□□□□□ -0.56
ACTN1-210ENST00000553779 CFBP00751 764 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms