RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MRPL12P52815 198 aaKnown RBP23.55■■□□□ 1.36
FOXA1-203ENST00000553751 APOBRQ0VD83 1088 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 SNX17Q15036 470 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 TLK2Q86UE8 772 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 ZSWIM6Q9HCJ5 1215 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 PXMP2Q9NR77 195 aa23.55■■□□□ 1.36
FOXA1-203ENST00000553751 FAM217BQ9NTX9 383 aaPredicted RBP23.55■■□□□ 1.36
FOXA1-203ENST00000553751 NID2Q14112 1375 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 A0A1W2PQ45 241 aaPredicted RBP23.54■■□□□ 1.36
FOXA1-203ENST00000553751 A0A1W2PQY0 241 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 hCG_1642624A0A1W2PR95 340 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 GCOM1H8Y6P7 765 aaPredicted RBP23.54■■□□□ 1.36
FOXA1-203ENST00000553751 POLR2MP0CAP2 368 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 EIF2AK2P19525 551 aaKnown RBP23.54■■□□□ 1.36
FOXA1-203ENST00000553751 ACLYP53396 1101 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 FUT2Q10981 343 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 KCNA10Q16322 511 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 DUSP28Q4G0W2 176 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 ARHGEF16Q5VV41 709 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 SLC39A5Q6ZMH5 540 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 NOL8Q76FK4 1167 aaKnown RBP23.54■■□□□ 1.36
FOXA1-203ENST00000553751 RUFY3Q7L099 469 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 IWS1Q96ST2 819 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 SPC25Q9HBM1 224 aa23.54■■□□□ 1.36
FOXA1-203ENST00000553751 MOXD2PA6NHM9 499 aa23.53■■□□□ 1.36
FOXA1-203ENST00000553751 CDC27P30260 824 aa23.53■■□□□ 1.36
FOXA1-203ENST00000553751 WDR11Q9BZH6 1224 aa23.53■■□□□ 1.36
FOXA1-203ENST00000553751 TM6SF1Q9BZW5 370 aa23.53■■□□□ 1.36
FOXA1-203ENST00000553751 Q9Y3F1 56 aa23.53■■□□□ 1.36
FOXA1-203ENST00000553751 RTP1P59025 263 aa23.52■■□□□ 1.36
FOXA1-203ENST00000553751 BEX3Q00994 111 aa23.52■■□□□ 1.36
FOXA1-203ENST00000553751 C1orf53Q5VUE5 145 aa23.52■■□□□ 1.36
FOXA1-203ENST00000553751 PCSK9Q8NBP7 692 aaKnown RBP23.52■■□□□ 1.36
FOXA1-203ENST00000553751 NAP1L2Q9ULW6 460 aaPredicted RBP23.52■■□□□ 1.36
FOXA1-203ENST00000553751 ASGR1P07306 291 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 NR3C2P08235 984 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 METAP2P50579 478 aaKnown RBP eCLIP23.51■■□□□ 1.35
FOXA1-203ENST00000553751 TOB2Q14106 344 aaPredicted RBP23.51■■□□□ 1.35
FOXA1-203ENST00000553751 STXBP2Q15833 593 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 GNASQ5JWF2 1037 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 SCFD2Q8WU76 684 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 PDCD2LQ9BRP1 358 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 UPF3BQ9BZI7 483 aaKnown RBP23.51■■□□□ 1.35
FOXA1-203ENST00000553751 AP5M1Q9H0R1 490 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 CYP46A1Q9Y6A2 500 aa23.51■■□□□ 1.35
FOXA1-203ENST00000553751 DYNC1LI2O43237 492 aaPredicted RBP23.5■■□□□ 1.35
FOXA1-203ENST00000553751 EVCP57679 992 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 PGM5Q15124 567 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 PPP2R5BQ15173 497 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 FSCN1Q16658 493 aaKnown RBP23.5■■□□□ 1.35
FOXA1-203ENST00000553751 TRIM60Q495X7 471 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 FCHSD1Q86WN1 690 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 IL31RAQ8NI17 732 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 ZMYND8Q9ULU4 1186 aaPredicted RBP23.5■■□□□ 1.35
FOXA1-203ENST00000553751 ATP11BQ9Y2G3 1177 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 FRMPD4Q14CM0 1322 aa23.5■■□□□ 1.35
FOXA1-203ENST00000553751 KIAA1217Q5T5P2 1943 aa23.49■■□□□ 1.35
FOXA1-203ENST00000553751 PIK3CDO00329 1044 aa23.49■■□□□ 1.35
FOXA1-203ENST00000553751 ARIH2O95376 493 aa23.49■■□□□ 1.35
FOXA1-203ENST00000553751 ADD1P35611 737 aaKnown RBP23.49■■□□□ 1.35
FOXA1-203ENST00000553751 HEATR3Q7Z4Q2 680 aa23.49■■□□□ 1.35
FOXA1-203ENST00000553751 GPKOWQ92917 476 aaPredicted RBP eCLIP23.49■■□□□ 1.35
FOXA1-203ENST00000553751 STARD7Q9NQZ5 370 aa23.49■■□□□ 1.35
FOXA1-203ENST00000553751 RANBP2P49792 3224 aaKnown RBP23.48■■□□□ 1.35
FOXA1-203ENST00000553751 MEIS2O14770 477 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 NKRFO15226 690 aaKnown RBP eCLIP23.48■■□□□ 1.35
FOXA1-203ENST00000553751 EIF3JO75822 258 aaKnown RBP23.48■■□□□ 1.35
FOXA1-203ENST00000553751 TXNP10599 105 aaKnown RBP23.48■■□□□ 1.35
FOXA1-203ENST00000553751 SYN1P17600 705 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 TTLL4Q14679 1199 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 WWC2Q6AWC2 1192 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 CCDC62Q6P9F0 684 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 USP17L6PQ6QN14 398 aa23.48■■□□□ 1.35
FOXA1-203ENST00000553751 CCDC196A0A1B0GTZ2 297 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 ANAPC15P60006 121 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 CHRDL2Q6WN34 429 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 SEPT14Q6ZU15 432 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 VSIG10LQ86VR7 867 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 COPS5Q92905 334 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 GLT1D1Q96MS3 346 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 PCDH10Q9P2E7 1040 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 V9GY48 417 aaPredicted RBP23.47■■□□□ 1.35
FOXA1-203ENST00000553751 ELP1O95163 1332 aa23.47■■□□□ 1.35
FOXA1-203ENST00000553751 RGS20O76081 388 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 SEC24BO95487 1268 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 MYCLP12524 364 aaPredicted RBP23.46■■□□□ 1.35
FOXA1-203ENST00000553751 PDIA3P30101 505 aaKnown RBP23.46■■□□□ 1.35
FOXA1-203ENST00000553751 TYW1BQ6NUM6 668 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 OR6J1Q8NGC5 347 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 SMARCC2Q8TAQ2 1214 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 CUL5Q93034 780 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 IL17RAQ96F46 866 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 PSTPIP2Q9H939 334 aa23.46■■□□□ 1.35
FOXA1-203ENST00000553751 COLQQ9Y215 455 aaPredicted RBP23.46■■□□□ 1.35
FOXA1-203ENST00000553751 EIF5BO60841 1220 aaKnown RBP23.45■■□□□ 1.34
FOXA1-203ENST00000553751 CCND2P30279 289 aa23.45■■□□□ 1.34
FOXA1-203ENST00000553751 PPP1R18Q6NYC8 613 aa23.45■■□□□ 1.34
FOXA1-203ENST00000553751 CXCL17Q6UXB2 119 aa23.45■■□□□ 1.34
FOXA1-203ENST00000553751 PRO3102Q9H379 93 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms