RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
TMEM253-202ENST00000553744 LENG1Q96BZ8 264 aaPredicted RBP13.69□□□□□ -0.22
TMEM253-202ENST00000553744 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
TMEM253-202ENST00000553744 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
TMEM253-202ENST00000553744 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
TMEM253-202ENST00000553744 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
TMEM253-202ENST00000553744 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
TMEM253-202ENST00000553744 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 ADCY6O43306 1168 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
TMEM253-202ENST00000553744 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
TMEM253-202ENST00000553744 STK3Q13188 491 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
TMEM253-202ENST00000553744 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 DIS3LQ8TF46 1054 aaKnown RBP13.68□□□□□ -0.22
TMEM253-202ENST00000553744 CUL5Q93034 780 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 PHKBQ93100 1093 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 KIF2CQ99661 725 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 RNF26Q9BY78 433 aaPredicted RBP13.68□□□□□ -0.22
TMEM253-202ENST00000553744 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
TMEM253-202ENST00000553744 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
TMEM253-202ENST00000553744 STXBP3O00186 592 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 DNM1LO00429 736 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 MEIS2O14770 477 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 CPLX1O14810 134 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PFKFB2O60825 505 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SCG2P13521 617 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 NAPAP54920 295 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
TMEM253-202ENST00000553744 TNFAIP2Q03169 654 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SCRN1Q12765 414 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PKN1Q16512 942 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 TYW1BQ6NUM6 668 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PDCD2LQ9BRP1 358 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 PDGFCQ9NRA1 345 aa13.67□□□□□ -0.22
TMEM253-202ENST00000553744 RBM47A0AV96 593 aaKnown RBP13.66□□□□□ -0.22
TMEM253-202ENST00000553744 ADAMTS4O75173 837 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 PGK1P00558 417 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 NR3C2P08235 984 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 COL6A1P12109 1028 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 PGM5Q15124 567 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 LRRC41Q15345 812 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 STXBP2Q15833 593 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 GJC2Q5T442 439 aaPredicted RBP13.66□□□□□ -0.22
TMEM253-202ENST00000553744 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
TMEM253-202ENST00000553744 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
TMEM253-202ENST00000553744 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 GNEQ9Y223 722 aaKnown RBP13.66□□□□□ -0.22
TMEM253-202ENST00000553744 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
TMEM253-202ENST00000553744 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 SMPD1P17405 629 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 CCND2P30279 289 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 ADCY7P51828 1080 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 SSRP1Q08945 709 aaKnown RBP13.65□□□□□ -0.22
TMEM253-202ENST00000553744 UBE2SQ16763 222 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 ME3Q16798 604 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 RNF180Q86T96 592 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 SCFD2Q8WU76 684 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
TMEM253-202ENST00000553744 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
TMEM253-202ENST00000553744 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
TMEM253-202ENST00000553744 CDKL5O76039 1030 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 DEXIO95424 95 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 LARGE1O95461 756 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
TMEM253-202ENST00000553744 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
TMEM253-202ENST00000553744 CST5P28325 142 aaPredicted RBP13.64□□□□□ -0.23
TMEM253-202ENST00000553744 GJA9P57773 515 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 NKX3-2P78367 333 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 RABEP1Q15276 862 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 DUSP28Q4G0W2 176 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 TLK2Q86UE8 772 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms