RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 CAGE1Q8TC20 777 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 AFAP1L1Q8TED9 768 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 CHURC1Q8WUH1 139 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 MRPL38Q96DV4 380 aaKnown RBP11.46□□□□□ -0.57
CHD8-205ENST00000553651 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
CHD8-205ENST00000553651 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 ATG2AQ2TAZ0 1938 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 LOC102724159A0A0B4J2E5 919 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 MINDY4BA8MYZ0 360 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 KPNA6O60684 536 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 ARIH2O95376 493 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
CHD8-205ENST00000553651 SELPP16109 830 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 EDNRBP24530 442 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 IRS1P35568 1242 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 BAATQ14032 418 aaPredicted RBP11.45□□□□□ -0.58
CHD8-205ENST00000553651 MBTPS1Q14703 1052 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 PWP2Q15269 919 aaKnown RBP11.45□□□□□ -0.58
CHD8-205ENST00000553651 PTGISQ16647 500 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
CHD8-205ENST00000553651 OSBP2Q969R2 916 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
CHD8-205ENST00000553651 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
CHD8-205ENST00000553651 MICAL3Q7RTP6 2002 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 ABHD14A-ACY1A0A1B0GW23 586 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
CHD8-205ENST00000553651 NFIBO00712 420 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 NKRFO15226 690 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD8-205ENST00000553651 ICAM1P05362 532 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 MCCP23508 829 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 LTBRP36941 435 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 HTRA4P83105 476 aaPredicted RBP11.44□□□□□ -0.58
CHD8-205ENST00000553651 TRIM71Q2Q1W2 868 aaKnown RBP11.44□□□□□ -0.58
CHD8-205ENST00000553651 IER5LQ5T953 404 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 KCTD1Q719H9 257 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 ADHFE1Q8IWW8 467 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
CHD8-205ENST00000553651 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 CLEC4DQ8WXI8 215 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 KAT2BQ92831 832 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
CHD8-205ENST00000553651 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
CHD8-205ENST00000553651 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 ST18O60284 1047 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 CKBP12277 381 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 SLC1A4P43007 532 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 PPP2R5BQ15173 497 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 HERC4Q5GLZ8 1057 aaPredicted RBP11.43□□□□□ -0.58
CHD8-205ENST00000553651 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHD8-205ENST00000553651 WNT8BQ93098 351 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
CHD8-205ENST00000553651 RANBP17Q9H2T7 1088 aaKnown RBP11.43□□□□□ -0.58
CHD8-205ENST00000553651 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
CHD8-205ENST00000553651 PARNO95453 639 aaKnown RBP11.42□□□□□ -0.58
CHD8-205ENST00000553651 NOVP48745 357 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 TCF15Q12870 199 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 ZSCAN25Q6NSZ9 544 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 FAM117BQ6P1L5 589 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
CHD8-205ENST00000553651 CCDC155Q8N6L0 562 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 IL17RBQ9NRM6 502 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 MUTYHQ9UIF7 546 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 NOD1Q9Y239 953 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 INSL6Q9Y581 213 aa11.42□□□□□ -0.58
CHD8-205ENST00000553651 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
CHD8-205ENST00000553651 RAD50Q92878 1312 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 RIF1Q5UIP0 2472 aaKnown RBP11.41□□□□□ -0.58
CHD8-205ENST00000553651 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 H3BNC9 293 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 GPAA1O43292 621 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 EFCAB14O75071 495 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 MMP3P08254 477 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 TFAP4Q01664 338 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
CHD8-205ENST00000553651 IKBKEQ14164 716 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 CTC1Q2NKJ3 1217 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 BRDTQ58F21 947 aaPredicted RBP11.41□□□□□ -0.58
CHD8-205ENST00000553651 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
CHD8-205ENST00000553651 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHD8-205ENST00000553651 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms