RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 STIM2Q9P246 746 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 WWC3Q9ULE0 1092 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 RBM8AQ9Y5S9 174 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 SLC4A4Q9Y6R1 1079 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 COL4A1P02462 1669 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 MYO5AQ9Y4I1 1855 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 ARFGEF1Q9Y6D6 1849 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 MYH2Q9UKX2 1941 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 LTBP1Q14766 1721 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 GPR75-ASB3A0A0A6YYF3 556 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 M0R2C6 588 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 MBD4O95243 580 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 FGAP02671 866 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 FSTP19883 344 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 RPS12P25398 132 aaKnown RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 SCNN1AP37088 669 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 USP5P45974 858 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 TDO2P48775 406 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 RBM5P52756 815 aaKnown RBP eCLIP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ATP11AP98196 1134 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 PTH1RQ03431 593 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 CREB3L3Q68CJ9 461 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 Q6ZS46 218 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ZNF589Q86UQ0 364 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 NLGN2Q8NFZ4 835 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 KCNB2Q92953 911 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 IL17RAQ96F46 866 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 NAPBQ9H115 298 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 RNF41Q9H4P4 317 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ARMT1Q9H993 441 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ZNF287Q9HBT7 754 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ZNF277Q9NRM2 450 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 TTF2Q9UNY4 1162 aaKnown RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 MROH7-TTC4A0A0A0MT08 1334 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 ZMYM6O95789 1325 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 BRCA1P38398 1863 aaKnown RBP5.92□□□□□ -1.46
VTI1B-202ENST00000553619 FER1L6Q2WGJ9 1857 aa5.92□□□□□ -1.46
VTI1B-202ENST00000553619 GSG1L2A8MUP6 293 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 FZD9O00144 591 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 SLC27A2O14975 620 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 MYO1BO43795 1136 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 SMNDC1O75940 238 aaKnown RBP eCLIP5.91□□□□□ -1.46
VTI1B-202ENST00000553619 PCP11498 1178 aaKnown RBP5.91□□□□□ -1.46
VTI1B-202ENST00000553619 LMNB1P20700 586 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 BTDP43251 543 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 HYAL2Q12891 473 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 ANKRD1Q15327 319 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 GPR162Q16538 588 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 DACT2Q5SW24 774 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 ADAMTSL4Q6UY14 1074 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 CCDC129Q6ZRS4 1044 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 TTC6Q86TZ1 520 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 MAP4K3Q8IVH8 894 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 HSCBQ8IWL3 235 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 TMEM130Q8N3G9 435 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 GALNT11Q8NCW6 608 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 OR13H1Q8NG92 308 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 NCOA7Q8NI08 942 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 GPR152Q8TDT2 470 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 DPF2Q92785 391 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 SNX21Q969T3 373 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 NEK1Q96PY6 1258 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 RIOK1Q9BRS2 568 aaKnown RBP5.91□□□□□ -1.46
VTI1B-202ENST00000553619 KRT23Q9C075 422 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 CNNM2Q9H8M5 875 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 AATFQ9NY61 560 aaKnown RBP eCLIP5.91□□□□□ -1.46
VTI1B-202ENST00000553619 TMOD2Q9NZR1 351 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 JAG2Q9Y219 1238 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 CYP46A1Q9Y6A2 500 aa5.91□□□□□ -1.46
VTI1B-202ENST00000553619 YDJCA8MPS7 323 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 F8W031 263 aaPredicted RBP5.9□□□□□ -1.46
VTI1B-202ENST00000553619 H7C1D1 291 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 NFKBIEO00221 500 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 PSMD14O00487 310 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 RAD17O75943 681 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 WISP1O95388 367 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 POLR3DP05423 398 aaPredicted RBP5.9□□□□□ -1.46
VTI1B-202ENST00000553619 GLB1P16278 677 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 CRKP46108 304 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 NEK4P51957 841 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 DYNLL1P63167 89 aaKnown RBP5.9□□□□□ -1.46
VTI1B-202ENST00000553619 FGD1P98174 961 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 CXCL9Q07325 125 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 PDE4BQ07343 736 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 DLGAP5Q15398 846 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 SBK1Q52WX2 424 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 TXNDC11Q6PKC3 985 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 MFSD6Q6ZSS7 791 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 RUFY3Q7L099 469 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.9□□□□□ -1.46
VTI1B-202ENST00000553619 RALYLQ86SE5 291 aaKnown RBP5.9□□□□□ -1.46
VTI1B-202ENST00000553619 KIAA0825Q8IV33 1275 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 TEX11Q8IYF3 940 aa5.9□□□□□ -1.46
VTI1B-202ENST00000553619 TMTC2Q8N394 836 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms