RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 PSTPIP2Q9H939 334 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 PCDHA4Q9UN74 947 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 KCNJ14Q9UNX9 436 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 MYH15Q9Y2K3 1946 aa11.17□□□□□ -0.62
TMEM260-204ENST00000553335 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-204ENST00000553335 GCOM1H8Y6P7 765 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-204ENST00000553335 STX6O43752 255 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 PEX10O60683 326 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 TBC1D8O95759 1140 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 CFBP00751 764 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 MAPK4P31152 587 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 KRT2P35908 639 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 GUCY1B3Q02153 619 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 BLIDQ8IZY5 108 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 DAGLBQ8NCG7 672 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 GJB4Q9NTQ9 266 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
TMEM260-204ENST00000553335 STRNO43815 780 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 FCER1AP12319 257 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 TAL1P17542 331 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-204ENST00000553335 NUCB2P80303 420 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 SP3Q02447 781 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 HIC1Q14526 733 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 KCTD2Q14681 263 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 KIF22Q14807 665 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 NSMFQ6X4W1 530 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
TMEM260-204ENST00000553335 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
TMEM260-204ENST00000553335 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 KDM4CQ9H3R0 1056 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
TMEM260-204ENST00000553335 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 PFASO15067 1338 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 SPDYE3A6NKU9 549 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 NFIBO00712 420 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 MEIS2O14770 477 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 FOSP01100 380 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-204ENST00000553335 HSD17B4P51659 736 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 LBX1P52954 281 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 GHRHRQ02643 423 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 MMP19Q99542 508 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 PORCNQ9H237 461 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 FOXP1Q9H334 677 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-204ENST00000553335 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
TMEM260-204ENST00000553335 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-204ENST00000553335 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 LCTP09848 1927 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 BTBD18B2RXH4 712 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 OPLAHO14841 1288 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 PTPREP23469 700 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 FCGRTP55899 365 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 JAKMIP3Q5VZ66 844 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 KRT25Q7Z3Z0 450 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 TBC1D5Q92609 795 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 MPHOSPH6Q99547 160 aaKnown RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
TMEM260-204ENST00000553335 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 PCDHA6Q9UN73 950 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 PCDHA8Q9Y5H6 950 aa11.13□□□□□ -0.63
TMEM260-204ENST00000553335 ZSWIM8A7E2V4 1837 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 B4DLN1 442 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 M0R2N6 131 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 GPR25O00155 361 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
TMEM260-204ENST00000553335 FKTNO75072 461 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-204ENST00000553335 LACTBP83111 547 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms