RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TCEANC2Q96MN5 208 aa17.72■□□□□ 0.43
SHMT2-204ENST00000553324 STARD7Q9NQZ5 370 aa17.72■□□□□ 0.43
SHMT2-204ENST00000553324 PXMP2Q9NR77 195 aa17.72■□□□□ 0.43
SHMT2-204ENST00000553324 PRKAG2Q9UGJ0 569 aa17.72■□□□□ 0.43
SHMT2-204ENST00000553324 SMCHD1A6NHR9 2005 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 OPLAHO14841 1288 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 ADCY6O43306 1168 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 PLEKHA8P1O95397 391 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 ASGR1P07306 291 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 RPS6KB1P23443 525 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 RTP1P59025 263 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 Q6ZUG5 572 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 CUL5Q93034 780 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 SEZ6LQ9BYH1 1024 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 COL20A1Q9P218 1284 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
SHMT2-204ENST00000553324 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 NR3C2P08235 984 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
SHMT2-204ENST00000553324 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
SHMT2-204ENST00000553324 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 ATP11BQ9Y2G3 1177 aa17.7■□□□□ 0.42
SHMT2-204ENST00000553324 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
SHMT2-204ENST00000553324 GOLGA8AA7E2F4 631 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 TXNP10599 105 aaKnown RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 EIF2AK2P19525 551 aaKnown RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 CPT1AP50416 773 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 RUFY3Q7L099 469 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 RAB11FIP4Q86YS3 637 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 CMTR1Q8N1G2 835 aaKnown RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 TOX2Q96NM4 488 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 ZSWIM6Q9HCJ5 1215 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-204ENST00000553324 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
SHMT2-204ENST00000553324 MYADML2A6NDP7 307 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 CTAGE5O15320 804 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 KPNA6O60684 536 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■■■■□ 21
SHMT2-204ENST00000553324 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 FCHSD1Q86WN1 690 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 BRF1Q92994 677 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 PDCD2LQ9BRP1 358 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
SHMT2-204ENST00000553324 A0A0U1RQG5 324 aaPredicted RBP17.67■□□□□ 0.42
SHMT2-204ENST00000553324 A0A1W2PPC1 479 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 STAM2O75886 525 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 TGFB3P10600 412 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 CPA1P15085 419 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 CCND2P30279 289 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 BMP8BP34820 402 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 BEX3Q00994 111 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 TRIM60Q495X7 471 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 ANKRD33Q7Z3H0 272 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
SHMT2-204ENST00000553324 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
SHMT2-204ENST00000553324 POLR3EQ9NVU0 708 aa17.67■□□□□ 0.42
SHMT2-204ENST00000553324 ARVCFO00192 962 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 MYCLP12524 364 aaPredicted RBP17.66■□□□□ 0.42
SHMT2-204ENST00000553324 SYN1P17600 705 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 EVCP57679 992 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 ANAPC15P60006 121 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 TLE2Q04725 743 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 APOBRQ0VD83 1088 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 PGM5Q15124 567 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 HABP4Q5JVS0 413 aaKnown RBP17.66■□□□□ 0.42
SHMT2-204ENST00000553324 XRRA1Q6P2D8 792 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 CCDC62Q6P9F0 684 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 GLT8D2Q9H1C3 349 aa17.66■□□□□ 0.42
SHMT2-204ENST00000553324 RBM27Q9P2N5 1060 aaKnown RBP17.66■□□□□ 0.42
SHMT2-204ENST00000553324 V9GY48 417 aaPredicted RBP17.66■□□□□ 0.42
SHMT2-204ENST00000553324 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 GH1P01241 217 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
SHMT2-204ENST00000553324 CDK7P50613 346 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-204ENST00000553324 FUT2Q10981 343 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 TMEM63BQ5T3F8 832 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 GDF15Q99988 308 aa17.65■□□□□ 0.42
SHMT2-204ENST00000553324 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms