RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 WDR5P61964 334 aaKnown RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 PTPN11Q06124 597 aaPredicted RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 COL9A2Q14055 689 aaPredicted RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 COL19A1Q14993 1142 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 SEPT2Q15019 361 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 TCEAL5Q5H9L2 206 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 NUDT18Q6ZVK8 323 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 ZNF384Q8TF68 577 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 SLC39A7Q92504 469 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 TATDN2Q93075 761 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 PPP2R3CQ969Q6 453 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 RMDN1Q96DB5 314 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 TRMT13Q9NUP7 481 aaKnown RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 HMG20BQ9P0W2 317 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 FBXO40Q9UH90 709 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 CD207Q9UJ71 328 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 BAHCC1Q9P281 2608 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 IL16Q14005 1332 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 DNAJC25-GNG10A0A024R161 153 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 PPP1R3GB7ZBB8 358 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 C3orf80F5H4A9 247 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ZBED4O75132 1171 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 POLR3DP05423 398 aaPredicted RBP6.25□□□□□ -1.41
CKAP4-203ENST00000553039 RB1P06400 928 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 C7P10643 843 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ADORA1P30542 326 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 VCPP55072 806 aaKnown RBP6.25□□□□□ -1.41
CKAP4-203ENST00000553039 PSMC6P62333 389 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 CBX2Q14781 532 aaPredicted RBP6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ACAP1Q15027 740 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 CTC1Q2NKJ3 1217 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 EPC2Q52LR7 807 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 NFRKBQ6P4R8 1299 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 CNKSR3Q6P9H4 555 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 TMEM179Q6ZVK1 233 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ARMCX2Q7L311 632 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 FRMD5Q7Z6J6 570 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 RPAINQ86UA6 219 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 TLK2Q86UE8 772 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 CAGE1Q8TC20 777 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.25□□□□□ -1.41
CKAP4-203ENST00000553039 LRRN4Q8WUT4 740 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 TEX13BQ9BXU2 312 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 USP44Q9H0E7 712 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 LMAN2LQ9H0V9 348 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 VCPKMTQ9H867 229 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
CKAP4-203ENST00000553039 TMX2Q9Y320 296 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 TECTAO75443 2155 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 ACACBO00763 2458 aa6.25□□□□□ -1.41
CKAP4-203ENST00000553039 XIRP2A4UGR9 3374 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 LOC730098B7Z3J9 87 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 EYA4O95677 639 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 LMNAP02545 664 aaKnown RBP6.24□□□□□ -1.41
CKAP4-203ENST00000553039 AMHP03971 560 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 ICAM3P32942 547 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 LTBRP36941 435 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 SLC4A3P48751 1232 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 CPT1AP50416 773 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 FAM47CQ5HY64 1035 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 KIAA0319Q5VV43 1072 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 PHLDB3Q6NSJ2 640 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 TMED8Q6PL24 325 aaPredicted RBP6.24□□□□□ -1.41
CKAP4-203ENST00000553039 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 ZBTB33Q86T24 672 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 CCDC144CPQ8IYA2 1237 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 SPICE1Q8N0Z3 855 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 PRPF38AQ8NAV1 312 aaKnown RBP6.24□□□□□ -1.41
CKAP4-203ENST00000553039 RDH13Q8NBN7 331 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 PNMA1Q8ND90 353 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 CHST13Q8NET6 341 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 AFAP1L1Q8TED9 768 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 ASIC4Q96FT7 647 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 C17orf80Q9BSJ5 609 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 MTG1Q9BT17 334 aaPredicted RBP6.24□□□□□ -1.41
CKAP4-203ENST00000553039 IGFLR1Q9H665 355 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 PPP1R9AQ9ULJ8 1098 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 CFAP54Q96N23 3096 aa6.24□□□□□ -1.41
CKAP4-203ENST00000553039 EP300Q09472 2414 aaPredicted RBP6.24□□□□□ -1.41
CKAP4-203ENST00000553039 FRMPD3Q5JV73 1810 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 DOCK2Q92608 1830 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 NCOR2Q9Y618 2525 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 GVINP1Q7Z2Y8 2422 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 TRIM6-TRIM34B2RNG4 842 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CFAP99D6REC4 459 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 ATP2A1O14983 1001 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 SELPP16109 830 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 SMPD1P17405 629 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CYP7A1P22680 504 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 GUCY1A2P33402 732 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CLCN5P51795 746 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 EXOSC9Q06265 439 aaKnown RBP6.23□□□□□ -1.41
CKAP4-203ENST00000553039 ADAM15Q13444 863 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CLUL1Q15846 466 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CCDC158Q5M9N0 1113 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms