RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 CHURC1Q8WUH1 139 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PURBQ96QR8 312 aaKnown RBP13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 BOLA2Q9H3K6 86 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 KPNA6O60684 536 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 STAT2P52630 851 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 RBL2Q08999 1139 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 CNKSR3Q6P9H4 555 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 PRKAG3Q9UGI9 489 aa13.54□□□□□ -0.24
SUPT16H-202ENST00000552829 ABHD14A-ACY1A0A1B0GW23 586 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 ALDH5A1P51649 535 aaPredicted RBP13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 DHX38Q92620 1227 aaKnown RBP13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
SUPT16H-202ENST00000552829 ZFHX2Q9C0A1 2572 aaPredicted RBP13.52□□□□□ -0.24
SUPT16H-202ENST00000552829 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 NBNO60934 754 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 PARNO95453 639 aaKnown RBP13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 SELPP16109 830 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 SESTD1Q86VW0 696 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 ADHFE1Q8IWW8 467 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 MRPL38Q96DV4 380 aaKnown RBP13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 ATG2AQ2TAZ0 1938 aa13.52□□□□□ -0.25
SUPT16H-202ENST00000552829 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 ST18O60284 1047 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 PRDM1O75626 825 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 SNAP25P60880 206 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 PTGISQ16647 500 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 BRDTQ58F21 947 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 NSMFQ6X4W1 530 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 PRSS33Q8NF86 280 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 MFSD14AQ96MC6 490 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 EPB41L4AQ9HCS5 686 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 ADD3Q9UEY8 706 aaKnown RBP13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
SUPT16H-202ENST00000552829 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 EFCAB14O75071 495 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 MCCP23508 829 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 EDNRBP24530 442 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 IRS1P35568 1242 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 SLC1A4P43007 532 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 HTRA4P83105 476 aaPredicted RBP13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 HERC4Q5GLZ8 1057 aaPredicted RBP13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 LRRC8DQ7L1W4 858 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 COPS5Q92905 334 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 PABPC5Q96DU9 382 aaKnown RBP13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 NLRC5Q86WI3 1866 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
SUPT16H-202ENST00000552829 RAD50Q92878 1312 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 ICAM1P05362 532 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 CKBP12277 381 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 LTBRP36941 435 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 TIGD5Q53EQ6 642 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 SCFD2Q8WU76 684 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 KAT2BQ92831 832 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 OSBP2Q969R2 916 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 CCPG1Q9ULG6 757 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 INSL6Q9Y581 213 aa13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
SUPT16H-202ENST00000552829 RBAK-RBAKDNI3L0D1 243 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms