RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PPP2R5BQ15173 497 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 STXBP2Q15833 593 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 TDHQ8IZJ6 230 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 OR6J1Q8NGC5 347 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 COPS5Q92905 334 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 IWS1Q96ST2 819 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 PLXNA1Q9UIW2 1896 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-215ENST00000552374 OPLAHO14841 1288 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 MYL3P08590 195 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 MYCLP12524 364 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-215ENST00000552374 RAG1P15918 1043 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 ITGB8P26012 769 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 LIFRP42702 1097 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 GNAQP50148 359 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 CDK7P50613 346 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 TTLL4Q14679 1199 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 SYNE3Q6ZMZ3 975 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
TMEM116-215ENST00000552374 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 LZTS2Q9BRK4 669 aa12.64□□□□□ -0.39
TMEM116-215ENST00000552374 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 CABYRO75952 493 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 ARIH2O95376 493 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 NR3C2P08235 984 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 CALM1P0DP23 149 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 CALM2P0DP24 149 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 CALM3P0DP25 149 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 HSD17B4P51659 736 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 PSMC6P62333 389 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 ITGA7Q13683 1181 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 SRBD1Q8N5C6 995 aaKnown RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 FANCBQ8NB91 859 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 MAP3K20Q9NYL2 800 aaKnown RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
TMEM116-215ENST00000552374 LAMA4Q16363 1823 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
TMEM116-215ENST00000552374 KIAA0355O15063 1070 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 EIF3JO75822 258 aaKnown RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 SMARCA1P28370 1054 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 CPT1AP50416 773 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 FGD1P98174 961 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 KRT32Q14532 448 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 CHMP4BP1P59074 171 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 SHHQ15465 462 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-215ENST00000552374 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 MCM3APO60318 1980 aa12.62□□□□□ -0.39
TMEM116-215ENST00000552374 GRIN2DO15399 1336 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 TIMP1P01033 207 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
TMEM116-215ENST00000552374 CPA1P15085 419 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 LRIT3Q3SXY7 679 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 CUL5Q93034 780 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
TMEM116-215ENST00000552374 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-215ENST00000552374 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
TMEM116-215ENST00000552374 A6NJR5 290 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 SORBS3O60504 671 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 KPNA6O60684 536 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 REC8O95072 547 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 GH1P01241 217 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 PURAQ00577 322 aaKnown RBP12.6□□□□□ -0.39
TMEM116-215ENST00000552374 GHRHRQ02643 423 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 PGM5Q15124 567 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms