RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 COL19A1Q14993 1142 aa15.13■□□□□ 0.01
CACNB3-221ENST00000552022 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-221ENST00000552022 LRRC8DQ7L1W4 858 aa15.13■□□□□ 0.01
CACNB3-221ENST00000552022 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
CACNB3-221ENST00000552022 CLASRPQ8N2M8 674 aaKnown RBP15.13■□□□□ 0.01
CACNB3-221ENST00000552022 DHX38Q92620 1227 aaKnown RBP15.13■□□□□ 0.01
CACNB3-221ENST00000552022 COPS5Q92905 334 aa15.13■□□□□ 0.01
CACNB3-221ENST00000552022 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
CACNB3-221ENST00000552022 UPF3BQ9BZI7 483 aaKnown RBP15.13■□□□□ 0.01
CACNB3-221ENST00000552022 CTNNA3Q9UI47 895 aa15.13■□□□□ 0.01
CACNB3-221ENST00000552022 SPTBN4Q9H254 2564 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 PLA2G6O60733 806 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 ATP5JP18859 108 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 MCCP23508 829 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 CHMP4BP1P59074 171 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 IKQ13123 557 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-221ENST00000552022 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-221ENST00000552022 HSP90AB4PQ58FF6 505 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 TCEAL5Q5H9L2 206 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 GDF6Q6KF10 455 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-221ENST00000552022 CCDC155Q8N6L0 562 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 BANK1Q8NDB2 785 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 HAUS7Q99871 368 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 ADD3Q9UEY8 706 aaKnown RBP15.12■□□□□ 0.01
CACNB3-221ENST00000552022 MUTYHQ9UIF7 546 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 ISY1Q9ULR0 285 aaKnown RBP15.12■□□□□ 0.01
CACNB3-221ENST00000552022 FAM50BQ9Y247 325 aa15.12■□□□□ 0.01
CACNB3-221ENST00000552022 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-221ENST00000552022 RLBP1P12271 317 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 CKBP12277 381 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 LTBRP36941 435 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 SLC1A4P43007 532 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 PTPN5P54829 565 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 RBL2Q08999 1139 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 IKBKEQ14164 716 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 HERC4Q5GLZ8 1057 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-221ENST00000552022 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
CACNB3-221ENST00000552022 EP400NLQ6ZTU2 488 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 KCTD1Q719H9 257 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 PRR12Q9ULL5 1215 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 INSL6Q9Y581 213 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 KMT2EQ8IZD2 1858 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 RAD50Q92878 1312 aa15.11■□□□□ 0.01
CACNB3-221ENST00000552022 ZFHX2Q9C0A1 2572 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 PARNO95453 639 aaKnown RBP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 HTRA4P83105 476 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 TCF15Q12870 199 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 PTPROQ16827 1216 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 TIGD5Q53EQ6 642 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 SESTD1Q86VW0 696 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 RNF135Q8IUD6 432 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 NEDD1Q8NHV4 660 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-221ENST00000552022 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
CACNB3-221ENST00000552022 H3BNC9 293 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 NFIBO00712 420 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 EFCAB14O75071 495 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 FOXK2Q01167 660 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-221ENST00000552022 MBTPS1Q14703 1052 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 SMAD2Q15796 467 aaKnown RBP15.09■□□□□ 0.01
CACNB3-221ENST00000552022 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 RASGRP2Q7LDG7 609 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 SCFD2Q8WU76 684 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 KAT2BQ92831 832 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 EDAQ92838 391 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 EPB41L4AQ9HCS5 686 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-221ENST00000552022 CLDND1Q9NY35 253 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 MYO15AQ9UKN7 3530 aa15.09■□□□□ 0.01
CACNB3-221ENST00000552022 RALGAPA2Q2PPJ7 1873 aa15.08■□□□□ 0.01
CACNB3-221ENST00000552022 ARIH2O95376 493 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 ICAM1P05362 532 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 TSPY3P0CV98 308 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 TSPY8P0CW00 308 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 TXNP10599 105 aaKnown RBP15.08■□□□□ 0
CACNB3-221ENST00000552022 GPM6BQ13491 265 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
CACNB3-221ENST00000552022 ZNF287Q9HBT7 754 aa15.08■□□□□ 0
CACNB3-221ENST00000552022 ALG13Q9NP73 1137 aaKnown RBP15.08■□□□□ 0
CACNB3-221ENST00000552022 PTPRZ1P23471 2315 aaPredicted RBP15.08■□□□□ 0
CACNB3-221ENST00000552022 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
CACNB3-221ENST00000552022 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
CACNB3-221ENST00000552022 GFRA3O60609 400 aa15.07■□□□□ 0
CACNB3-221ENST00000552022 EDNRBP24530 442 aa15.07■□□□□ 0
CACNB3-221ENST00000552022 TFAP4Q01664 338 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms