RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 TLE2Q04725 743 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 SSRP1Q08945 709 aaKnown RBP8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 TROAPQ12815 778 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 CCDC178Q5BJE1 867 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 CCSAPQ6IQ19 270 aaPredicted RBP8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 RCSD1Q6JBY9 416 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 MMP19Q99542 508 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 SLC26A6Q9BXS9 759 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 KATNBL1Q9H079 304 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 KANSL2Q9H9L4 492 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 MKNK2Q9HBH9 465 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 TCP11L1Q9NUJ3 509 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 RBM28Q9NW13 759 aaKnown RBP8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 NYAP2Q9P242 653 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 ASTN1O14525 1302 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 SYNRGQ9UMZ2 1314 aa8.51□□□□□ -1.05
SMARCD1-210ENST00000551352 KIAA1217Q5T5P2 1943 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 A0A1W2PQ45 241 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 A0A1W2PQY0 241 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 F5H6K3 240 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 RBAK-RBAKDNI3L0D1 243 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 CTAGE5O15320 804 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 SLC25A27O95847 323 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TSPY3P0CV98 308 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TSPY8P0CW00 308 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 STAT3P40763 770 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 KLRC3Q07444 240 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 FUT2Q10981 343 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 KRT40Q6A162 431 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 ATL3Q6DD88 541 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 BRAPQ7Z569 592 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 DGKHQ86XP1 1220 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 ZNF444Q8N0Y2 327 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 ARRDC4Q8NCT1 418 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 KLHDC9Q8NEP7 349 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 LEO1Q8WVC0 666 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 WASF1Q92558 559 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 ZNF396Q96N95 335 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 AIFM3Q96NN9 605 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 IL17RBQ9NRM6 502 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 GJB4Q9NTQ9 266 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TMEM63CQ9P1W3 806 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TFIP11Q9UBB9 837 aaKnown RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TET1Q8NFU7 2136 aa8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 TRIP12Q14669 1992 aaPredicted RBP8.5□□□□□ -1.05
SMARCD1-210ENST00000551352 DEXIO95424 95 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 MYCNP04198 464 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 ZNF445P59923 1031 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 TRIM29Q14134 588 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 TMEM63BQ5T3F8 832 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 CTCFLQ8NI51 663 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 MKL1Q969V6 931 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SYAP1Q96A49 352 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 CEP95Q96GE4 821 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SPATA32Q96LK8 384 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 MAP3K14Q99558 947 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SLF1Q9BQI6 1058 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 RNF26Q9BY78 433 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SH2D4AQ9H788 454 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 KAT14Q9H8E8 782 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 RAVER2Q9HCJ3 691 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 GOPCQ9HD26 462 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 CLIP2Q9UDT6 1046 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 NRBP1Q9UHY1 535 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 CFAP45Q9UL16 551 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 ISY1Q9ULR0 285 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 SCN10AQ9Y5Y9 1956 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 ZNF536O15090 1300 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
SMARCD1-210ENST00000551352 MYH7BA7E2Y1 1941 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 KIF28PB7ZC32 967 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 ATP2A1O14983 1001 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 KIAA0355O15063 1070 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 PRPF3O43395 683 aaKnown RBP8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 RAD21O60216 631 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 PLEKHA8P1O95397 391 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 KIF5BP33176 963 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 CNTN2Q02246 1040 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 MAMDC4Q6UXC1 1216 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 C16orf59Q7L2K0 433 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms